Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20■□□□□ 0.79
PTPN1P18031 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PTPN1P18031 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PTPN1P18031 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.99■□□□□ 0.79
PTPN1P18031 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 AL049812.1-201ENST00000432563 2267 ntBASIC19.99■□□□□ 0.79
PTPN1P18031 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
PTPN1P18031 MCCD1P1-208ENST00000445732 328 ntBASIC19.99■□□□□ 0.79
PTPN1P18031 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.99■□□□□ 0.79
PTPN1P18031 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 AC006011.2-201ENST00000621313 1158 ntBASIC19.99■□□□□ 0.79
PTPN1P18031 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PTPN1P18031 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN1P18031 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.99■□□□□ 0.79
PTPN1P18031 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PTPN1P18031 KRT8P32-201ENST00000512863 1461 ntBASIC19.99■□□□□ 0.79
PTPN1P18031 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.98■□□□□ 0.79
PTPN1P18031 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PTPN1P18031 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.98■□□□□ 0.79
PTPN1P18031 RCC2P3-201ENST00000418112 1537 ntBASIC19.98■□□□□ 0.79
PTPN1P18031 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.98■□□□□ 0.79
PTPN1P18031 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
PTPN1P18031 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.98■□□□□ 0.79
PTPN1P18031 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PTPN1P18031 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.98■□□□□ 0.79
PTPN1P18031 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.98■□□□□ 0.79
PTPN1P18031 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.98■□□□□ 0.79
PTPN1P18031 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.98■□□□□ 0.79
PTPN1P18031 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.98■□□□□ 0.79
PTPN1P18031 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PTPN1P18031 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN1P18031 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPN1P18031 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPN1P18031 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PTPN1P18031 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPN1P18031 MIR1224-201ENST00000408193 85 ntBASIC19.97■□□□□ 0.79
PTPN1P18031 AC117947.1-201ENST00000427448 529 ntBASIC19.97■□□□□ 0.79
PTPN1P18031 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPN1P18031 COX11P1-201ENST00000489116 835 ntBASIC19.97■□□□□ 0.79
PTPN1P18031 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPN1P18031 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.97■□□□□ 0.79
PTPN1P18031 WWOX-216ENST00000569818 525 ntBASIC19.97■□□□□ 0.79
PTPN1P18031 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPN1P18031 AC139887.4-201ENST00000607877 719 ntBASIC19.97■□□□□ 0.79
PTPN1P18031 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.97■□□□□ 0.79
PTPN1P18031 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPN1P18031 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
PTPN1P18031 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPN1P18031 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
PTPN1P18031 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN1P18031 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PTPN1P18031 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPN1P18031 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPN1P18031 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms