Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CD28P10747 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
CD28P10747 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD28P10747 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD28P10747 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.77□□□□□ -0.04
CD28P10747 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD28P10747 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CD28P10747 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD28P10747 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD28P10747 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD28P10747 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD28P10747 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.77□□□□□ -0.05
CD28P10747 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD28P10747 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.77□□□□□ -0.05
CD28P10747 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.77□□□□□ -0.05
CD28P10747 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.77□□□□□ -0.05
CD28P10747 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD28P10747 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.77□□□□□ -0.05
CD28P10747 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CD28P10747 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.77□□□□□ -0.05
CD28P10747 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.77□□□□□ -0.05
CD28P10747 AC093458.2-201ENST00000623150 629 ntBASIC14.77□□□□□ -0.05
CD28P10747 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD28P10747 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD28P10747 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD28P10747 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
CD28P10747 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.77□□□□□ -0.05
CD28P10747 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD28P10747 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.77□□□□□ -0.05
CD28P10747 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CD28P10747 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD28P10747 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD28P10747 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.77□□□□□ -0.05
CD28P10747 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
CD28P10747 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.76□□□□□ -0.05
CD28P10747 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.76□□□□□ -0.05
CD28P10747 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CD28P10747 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.76□□□□□ -0.05
CD28P10747 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 TSPY21P-201ENST00000433481 731 ntBASIC14.76□□□□□ -0.05
CD28P10747 AC112907.2-201ENST00000448639 330 ntBASIC14.76□□□□□ -0.05
CD28P10747 NEK4P2-201ENST00000580004 1012 ntBASIC14.76□□□□□ -0.05
CD28P10747 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.76□□□□□ -0.05
CD28P10747 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.76□□□□□ -0.05
CD28P10747 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CD28P10747 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CD28P10747 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CD28P10747 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD28P10747 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.76□□□□□ -0.05
CD28P10747 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CD28P10747 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.75□□□□□ -0.05
CD28P10747 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CD28P10747 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.75□□□□□ -0.05
CD28P10747 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.75□□□□□ -0.05
CD28P10747 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CD28P10747 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.75□□□□□ -0.05
CD28P10747 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.75□□□□□ -0.05
CD28P10747 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.75□□□□□ -0.05
CD28P10747 CR769767.2-201ENST00000622735 460 ntBASIC14.75□□□□□ -0.05
CD28P10747 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CD28P10747 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CD28P10747 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.75□□□□□ -0.05
CD28P10747 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD28P10747 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.74□□□□□ -0.05
CD28P10747 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD28P10747 AC005332.1-201ENST00000577698 1310 ntBASIC14.74□□□□□ -0.05
CD28P10747 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms