Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC6P09630 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
HOXC6P09630 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC6P09630 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HOXC6P09630 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC6P09630 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC6P09630 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.35■■□□□ 1.01
HOXC6P09630 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.35■■□□□ 1.01
HOXC6P09630 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.35■■□□□ 1.01
HOXC6P09630 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.35■■□□□ 1.01
HOXC6P09630 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HOXC6P09630 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.35■■□□□ 1.01
HOXC6P09630 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.35■■□□□ 1.01
HOXC6P09630 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.35■■□□□ 1.01
HOXC6P09630 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.35■■□□□ 1.01
HOXC6P09630 KRT8P7-201ENST00000533003 1432 ntBASIC21.35■■□□□ 1.01
HOXC6P09630 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC6P09630 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC6P09630 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC6P09630 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC6P09630 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.35■■□□□ 1.01
HOXC6P09630 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
HOXC6P09630 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.34■■□□□ 1.01
HOXC6P09630 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.34■■□□□ 1.01
HOXC6P09630 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 EMBP1-201ENST00000458200 901 ntBASIC21.34■■□□□ 1.01
HOXC6P09630 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
HOXC6P09630 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.34■■□□□ 1.01
HOXC6P09630 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HOXC6P09630 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.34■■□□□ 1.01
HOXC6P09630 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.34■■□□□ 1.01
HOXC6P09630 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HOXC6P09630 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC6P09630 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC6P09630 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.33■■□□□ 1.01
HOXC6P09630 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC6P09630 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC6P09630 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
HOXC6P09630 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
HOXC6P09630 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC6P09630 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.33■■□□□ 1.01
HOXC6P09630 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC6P09630 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.33■■□□□ 1.01
HOXC6P09630 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.33■■□□□ 1.01
HOXC6P09630 AC009078.2-202ENST00000463353 338 ntBASIC21.33■■□□□ 1.01
HOXC6P09630 AC012615.1-201ENST00000565797 1299 ntBASIC21.33■■□□□ 1.01
HOXC6P09630 AL732292.2-201ENST00000609649 430 ntBASIC21.33■■□□□ 1.01
HOXC6P09630 AL121772.3-201ENST00000610840 674 ntBASIC21.33■■□□□ 1.01
HOXC6P09630 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HOXC6P09630 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HOXC6P09630 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC6P09630 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
HOXC6P09630 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HOXC6P09630 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
HOXC6P09630 AL109659.2-201ENST00000606809 1674 ntBASIC21.33■■□□□ 1
HOXC6P09630 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
HOXC6P09630 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HOXC6P09630 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.33■■□□□ 1
HOXC6P09630 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
HOXC6P09630 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC6P09630 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC6P09630 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC6P09630 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC6P09630 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC6P09630 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.32■■□□□ 1
HOXC6P09630 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.32■■□□□ 1
HOXC6P09630 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.32■■□□□ 1
HOXC6P09630 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.32■■□□□ 1
HOXC6P09630 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.32■■□□□ 1
HOXC6P09630 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.32■■□□□ 1
HOXC6P09630 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.32■■□□□ 1
HOXC6P09630 AL031008.1-201ENST00000619963 541 ntBASIC21.32■■□□□ 1
HOXC6P09630 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC6P09630 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.32■■□□□ 1
HOXC6P09630 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.32■■□□□ 1
HOXC6P09630 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC6P09630 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.32■■□□□ 1
HOXC6P09630 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC6P09630 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 HOXB1-202ENST00000577092 1414 ntBASIC21.31■■□□□ 1
HOXC6P09630 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.31■■□□□ 1
HOXC6P09630 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.31■■□□□ 1
HOXC6P09630 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
HOXC6P09630 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms