Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.05■□□□□ 0.64
RETP07949 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RETP07949 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RETP07949 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RETP07949 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RETP07949 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.05■□□□□ 0.64
RETP07949 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RETP07949 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RETP07949 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.05■□□□□ 0.64
RETP07949 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.05■□□□□ 0.64
RETP07949 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RETP07949 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.05■□□□□ 0.64
RETP07949 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RETP07949 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RETP07949 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.05■□□□□ 0.64
RETP07949 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RETP07949 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RETP07949 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.04■□□□□ 0.64
RETP07949 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RETP07949 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 AC087289.5-201ENST00000586076 3175 ntBASIC19.04■□□□□ 0.64
RETP07949 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RETP07949 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.04■□□□□ 0.64
RETP07949 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RETP07949 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RETP07949 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.04■□□□□ 0.64
RETP07949 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
RETP07949 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RETP07949 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.04■□□□□ 0.64
RETP07949 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.04■□□□□ 0.64
RETP07949 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.04■□□□□ 0.64
RETP07949 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.04■□□□□ 0.64
RETP07949 MIR3180-1-201ENST00000580374 94 ntBASIC19.04■□□□□ 0.64
RETP07949 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.04■□□□□ 0.64
RETP07949 MIR3180-3-201ENST00000584616 94 ntBASIC19.04■□□□□ 0.64
RETP07949 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RETP07949 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RETP07949 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RETP07949 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.03■□□□□ 0.64
RETP07949 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.03■□□□□ 0.64
RETP07949 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RETP07949 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RETP07949 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.03■□□□□ 0.64
RETP07949 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.03■□□□□ 0.64
RETP07949 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.03■□□□□ 0.64
RETP07949 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.03■□□□□ 0.64
RETP07949 AC011498.5-201ENST00000592027 486 ntBASIC19.03■□□□□ 0.64
RETP07949 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RETP07949 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.03■□□□□ 0.64
RETP07949 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RETP07949 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.02■□□□□ 0.64
RETP07949 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RETP07949 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RETP07949 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RETP07949 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RETP07949 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.02■□□□□ 0.64
RETP07949 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.02■□□□□ 0.64
RETP07949 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.02■□□□□ 0.64
RETP07949 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.02■□□□□ 0.64
RETP07949 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.02■□□□□ 0.64
RETP07949 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RETP07949 IFNL4P1-201ENST00000607083 540 ntBASIC19.02■□□□□ 0.64
RETP07949 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
RETP07949 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RETP07949 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.02■□□□□ 0.64
RETP07949 AC016734.2-201ENST00000624325 1377 ntBASIC19.02■□□□□ 0.64
RETP07949 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RETP07949 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RETP07949 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RETP07949 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RETP07949 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RETP07949 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RETP07949 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
RETP07949 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RETP07949 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RETP07949 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
RETP07949 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RETP07949 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms