Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
PDGFAP04085 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDGFAP04085 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.64■□□□□ 0.42
PDGFAP04085 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PDGFAP04085 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
PDGFAP04085 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.64■□□□□ 0.41
PDGFAP04085 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.64■□□□□ 0.41
PDGFAP04085 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PDGFAP04085 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PDGFAP04085 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.64■□□□□ 0.41
PDGFAP04085 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.64■□□□□ 0.41
PDGFAP04085 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PDGFAP04085 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
PDGFAP04085 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.64■□□□□ 0.41
PDGFAP04085 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
PDGFAP04085 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.64■□□□□ 0.41
PDGFAP04085 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.64■□□□□ 0.41
PDGFAP04085 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.64■□□□□ 0.41
PDGFAP04085 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PDGFAP04085 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PDGFAP04085 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.64■□□□□ 0.41
PDGFAP04085 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.64■□□□□ 0.41
PDGFAP04085 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFAP04085 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFAP04085 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFAP04085 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.63■□□□□ 0.41
PDGFAP04085 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PDGFAP04085 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
PDGFAP04085 LTB4R2-202ENST00000528054 3092 ntBASIC17.63■□□□□ 0.41
PDGFAP04085 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFAP04085 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.63■□□□□ 0.41
PDGFAP04085 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 ZNF444P1-201ENST00000559497 298 ntBASIC17.63■□□□□ 0.41
PDGFAP04085 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFAP04085 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.63■□□□□ 0.41
PDGFAP04085 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.63■□□□□ 0.41
PDGFAP04085 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PDGFAP04085 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFAP04085 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFAP04085 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFAP04085 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFAP04085 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.62■□□□□ 0.41
PDGFAP04085 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFAP04085 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.62■□□□□ 0.41
PDGFAP04085 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFAP04085 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PDGFAP04085 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.62■□□□□ 0.41
PDGFAP04085 AC004408.2-201ENST00000623613 2777 ntBASIC17.62■□□□□ 0.41
PDGFAP04085 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFAP04085 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFAP04085 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.62■□□□□ 0.41
PDGFAP04085 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.62■□□□□ 0.41
PDGFAP04085 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFAP04085 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.62■□□□□ 0.41
PDGFAP04085 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.62■□□□□ 0.41
PDGFAP04085 GCSHP2-201ENST00000560971 527 ntBASIC17.62■□□□□ 0.41
PDGFAP04085 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.62■□□□□ 0.41
PDGFAP04085 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.62■□□□□ 0.41
PDGFAP04085 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.62■□□□□ 0.41
PDGFAP04085 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.62■□□□□ 0.41
PDGFAP04085 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDGFAP04085 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.62■□□□□ 0.41
PDGFAP04085 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFAP04085 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.62■□□□□ 0.41
PDGFAP04085 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.62■□□□□ 0.41
PDGFAP04085 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFAP04085 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFAP04085 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PDGFAP04085 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.61■□□□□ 0.41
PDGFAP04085 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PDGFAP04085 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFAP04085 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms