Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNA1P02708 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA1P02708 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNA1P02708 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA1P02708 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CHRNA1P02708 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA1P02708 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA1P02708 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNA1P02708 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CHRNA1P02708 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA1P02708 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNA1P02708 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNA1P02708 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CHRNA1P02708 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CHRNA1P02708 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA1P02708 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNA1P02708 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA1P02708 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA1P02708 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHRNA1P02708 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CHRNA1P02708 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA1P02708 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA1P02708 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA1P02708 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
CHRNA1P02708 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNA1P02708 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA1P02708 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNA1P02708 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.55■□□□□ 0.88
CHRNA1P02708 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA1P02708 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA1P02708 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHRNA1P02708 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRNA1P02708 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRNA1P02708 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 KRT18P23-201ENST00000435622 1283 ntBASIC20.54■□□□□ 0.88
CHRNA1P02708 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRNA1P02708 KRT8P26-201ENST00000534154 1276 ntBASIC20.54■□□□□ 0.88
CHRNA1P02708 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.54■□□□□ 0.88
CHRNA1P02708 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CHRNA1P02708 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.54■□□□□ 0.88
CHRNA1P02708 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.54■□□□□ 0.88
CHRNA1P02708 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 AC093525.10-201ENST00000625130 1569 ntBASIC20.54■□□□□ 0.88
CHRNA1P02708 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA1P02708 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRNA1P02708 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 FEM1AP3-201ENST00000403722 1741 ntBASIC20.53■□□□□ 0.88
CHRNA1P02708 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRNA1P02708 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 RNF126P1-202ENST00000569893 925 ntBASIC20.53■□□□□ 0.88
CHRNA1P02708 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRNA1P02708 AL691432.3-201ENST00000621860 400 ntBASIC20.53■□□□□ 0.88
CHRNA1P02708 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHRNA1P02708 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRNA1P02708 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRNA1P02708 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRNA1P02708 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRNA1P02708 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRNA1P02708 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA1P02708 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHRNA1P02708 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA1P02708 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA1P02708 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA1P02708 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.52■□□□□ 0.88
CHRNA1P02708 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.52■□□□□ 0.88
CHRNA1P02708 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRNA1P02708 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRNA1P02708 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA1P02708 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA1P02708 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.52■□□□□ 0.88
CHRNA1P02708 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.52■□□□□ 0.88
CHRNA1P02708 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.52■□□□□ 0.88
CHRNA1P02708 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.52■□□□□ 0.88
CHRNA1P02708 AC104390.1-201ENST00000555663 520 ntBASIC20.52■□□□□ 0.88
CHRNA1P02708 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.52■□□□□ 0.88
CHRNA1P02708 AP002414.4-201ENST00000589764 1148 ntBASIC20.52■□□□□ 0.88
CHRNA1P02708 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.52■□□□□ 0.88
CHRNA1P02708 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms