Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KRT6AP02538 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 Z85996.1-201ENST00000494644 937 ntBASIC18.31■□□□□ 0.52
KRT6AP02538 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT6AP02538 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.31■□□□□ 0.52
KRT6AP02538 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 AC006058.3-201ENST00000606217 1069 ntBASIC18.31■□□□□ 0.52
KRT6AP02538 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT6AP02538 AC131212.4-201ENST00000623606 975 ntBASIC18.31■□□□□ 0.52
KRT6AP02538 AC073648.6-201ENST00000641589 218 ntBASIC18.31■□□□□ 0.52
KRT6AP02538 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT6AP02538 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
KRT6AP02538 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT6AP02538 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT6AP02538 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT6AP02538 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT6AP02538 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT6AP02538 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT6AP02538 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT6AP02538 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT6AP02538 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT6AP02538 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT6AP02538 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT6AP02538 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.3■□□□□ 0.52
KRT6AP02538 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT6AP02538 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 WIZP1-201ENST00000531444 2299 ntBASIC18.3■□□□□ 0.52
KRT6AP02538 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KRT6AP02538 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT6AP02538 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6AP02538 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
KRT6AP02538 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT6AP02538 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT6AP02538 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6AP02538 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
KRT6AP02538 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6AP02538 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 AP002982.1-201ENST00000492365 877 ntBASIC18.29■□□□□ 0.52
KRT6AP02538 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.29■□□□□ 0.52
KRT6AP02538 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6AP02538 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6AP02538 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.29■□□□□ 0.52
KRT6AP02538 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT6AP02538 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT6AP02538 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.28■□□□□ 0.52
KRT6AP02538 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.28■□□□□ 0.52
KRT6AP02538 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT6AP02538 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
KRT6AP02538 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 NIFKP9-201ENST00000419265 221 ntBASIC18.28■□□□□ 0.52
KRT6AP02538 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT6AP02538 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT6AP02538 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms