Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.22□□□□□ -0.13
HLA-DQA1P01909 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA1P01909 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 AC097381.1-201ENST00000429019 1296 ntBASIC14.21□□□□□ -0.13
HLA-DQA1P01909 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA1P01909 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQA1P01909 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.21□□□□□ -0.14
HLA-DQA1P01909 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
HLA-DQA1P01909 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.21□□□□□ -0.14
HLA-DQA1P01909 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQA1P01909 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQA1P01909 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.21□□□□□ -0.14
HLA-DQA1P01909 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQA1P01909 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQA1P01909 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 AC091799.1-201ENST00000422823 811 ntBASIC14.2□□□□□ -0.14
HLA-DQA1P01909 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 AC138907.5-202ENST00000569484 235 ntBASIC14.2□□□□□ -0.14
HLA-DQA1P01909 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 ZNF815P-204ENST00000434898 1737 ntBASIC14.2□□□□□ -0.14
HLA-DQA1P01909 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA1P01909 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQA1P01909 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms