Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.35■□□□□ 0.69
TOP3BO95985 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.35■□□□□ 0.69
TOP3BO95985 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TOP3BO95985 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TOP3BO95985 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP3BO95985 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.35■□□□□ 0.69
TOP3BO95985 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.35■□□□□ 0.69
TOP3BO95985 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TOP3BO95985 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TOP3BO95985 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.34■□□□□ 0.69
TOP3BO95985 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.34■□□□□ 0.69
TOP3BO95985 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
TOP3BO95985 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TOP3BO95985 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
TOP3BO95985 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.34■□□□□ 0.69
TOP3BO95985 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TOP3BO95985 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.33■□□□□ 0.69
TOP3BO95985 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TOP3BO95985 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TOP3BO95985 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TOP3BO95985 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TOP3BO95985 AC006333.2-201ENST00000607957 2099 ntBASIC19.33■□□□□ 0.69
TOP3BO95985 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.33■□□□□ 0.68
TOP3BO95985 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.33■□□□□ 0.68
TOP3BO95985 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.33■□□□□ 0.68
TOP3BO95985 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.33■□□□□ 0.68
TOP3BO95985 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TOP3BO95985 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TOP3BO95985 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TOP3BO95985 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TOP3BO95985 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TOP3BO95985 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TOP3BO95985 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TOP3BO95985 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TOP3BO95985 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.33■□□□□ 0.68
TOP3BO95985 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TOP3BO95985 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TOP3BO95985 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TOP3BO95985 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.32■□□□□ 0.68
TOP3BO95985 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TOP3BO95985 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TOP3BO95985 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP3BO95985 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP3BO95985 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TOP3BO95985 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP3BO95985 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.32■□□□□ 0.68
TOP3BO95985 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP3BO95985 AC063952.2-201ENST00000498792 1227 ntBASIC19.32■□□□□ 0.68
TOP3BO95985 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TOP3BO95985 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.32■□□□□ 0.68
TOP3BO95985 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP3BO95985 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP3BO95985 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TOP3BO95985 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.32■□□□□ 0.68
TOP3BO95985 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TOP3BO95985 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TOP3BO95985 TFP1-202ENST00000475455 1573 ntBASIC19.32■□□□□ 0.68
TOP3BO95985 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TOP3BO95985 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP3BO95985 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.31■□□□□ 0.68
TOP3BO95985 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TOP3BO95985 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.31■□□□□ 0.68
TOP3BO95985 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP3BO95985 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP3BO95985 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.31■□□□□ 0.68
TOP3BO95985 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.31■□□□□ 0.68
TOP3BO95985 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.31■□□□□ 0.68
TOP3BO95985 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP3BO95985 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP3BO95985 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP3BO95985 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP3BO95985 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.31■□□□□ 0.68
TOP3BO95985 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.31■□□□□ 0.68
TOP3BO95985 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TOP3BO95985 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms