Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19■□□□□ 0.63
VAPBO95292 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 AC026471.1-201ENST00000564629 3026 ntBASIC19■□□□□ 0.63
VAPBO95292 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAPBO95292 KRT16P1-201ENST00000399124 1418 ntBASIC19■□□□□ 0.63
VAPBO95292 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
VAPBO95292 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.99■□□□□ 0.63
VAPBO95292 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
VAPBO95292 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.99■□□□□ 0.63
VAPBO95292 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.99■□□□□ 0.63
VAPBO95292 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.99■□□□□ 0.63
VAPBO95292 RCC2P6-201ENST00000526625 1557 ntBASIC18.99■□□□□ 0.63
VAPBO95292 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 PRORSD1P-201ENST00000295112 541 ntBASIC18.99■□□□□ 0.63
VAPBO95292 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.99■□□□□ 0.63
VAPBO95292 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.99■□□□□ 0.63
VAPBO95292 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.99■□□□□ 0.63
VAPBO95292 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.99■□□□□ 0.63
VAPBO95292 AC091390.4-202ENST00000476426 537 ntBASIC18.99■□□□□ 0.63
VAPBO95292 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.99■□□□□ 0.63
VAPBO95292 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VAPBO95292 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
VAPBO95292 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.99■□□□□ 0.63
VAPBO95292 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
VAPBO95292 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VAPBO95292 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.98■□□□□ 0.63
VAPBO95292 WIZP1-201ENST00000531444 2299 ntBASIC18.98■□□□□ 0.63
VAPBO95292 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VAPBO95292 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.98■□□□□ 0.63
VAPBO95292 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VAPBO95292 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VAPBO95292 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.98■□□□□ 0.63
VAPBO95292 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
VAPBO95292 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.98■□□□□ 0.63
VAPBO95292 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.98■□□□□ 0.63
VAPBO95292 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAPBO95292 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.97■□□□□ 0.63
VAPBO95292 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
VAPBO95292 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
VAPBO95292 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
VAPBO95292 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.97■□□□□ 0.63
VAPBO95292 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.97■□□□□ 0.63
VAPBO95292 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.97■□□□□ 0.63
VAPBO95292 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VAPBO95292 AC004951.3-201ENST00000418645 1148 ntBASIC18.97■□□□□ 0.63
VAPBO95292 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VAPBO95292 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.97■□□□□ 0.63
VAPBO95292 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.97■□□□□ 0.63
VAPBO95292 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.97■□□□□ 0.63
VAPBO95292 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.97■□□□□ 0.63
VAPBO95292 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.97■□□□□ 0.63
VAPBO95292 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.97■□□□□ 0.63
VAPBO95292 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms