Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN2BO60939 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
SCN2BO60939 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.93■□□□□ 0.46
SCN2BO60939 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN2BO60939 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.93■□□□□ 0.46
SCN2BO60939 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SCN2BO60939 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SCN2BO60939 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN2BO60939 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.93■□□□□ 0.46
SCN2BO60939 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.93■□□□□ 0.46
SCN2BO60939 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.93■□□□□ 0.46
SCN2BO60939 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN2BO60939 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN2BO60939 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.93■□□□□ 0.46
SCN2BO60939 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SCN2BO60939 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.93■□□□□ 0.46
SCN2BO60939 AL023875.1-201ENST00000640777 796 ntBASIC17.93■□□□□ 0.46
SCN2BO60939 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN2BO60939 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.93■□□□□ 0.46
SCN2BO60939 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN2BO60939 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.93■□□□□ 0.46
SCN2BO60939 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN2BO60939 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 BCL2-203ENST00000589955 5011 ntBASIC17.93■□□□□ 0.46
SCN2BO60939 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN2BO60939 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.92■□□□□ 0.46
SCN2BO60939 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SCN2BO60939 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
SCN2BO60939 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SCN2BO60939 KRT16P5-201ENST00000455284 522 ntBASIC17.92■□□□□ 0.46
SCN2BO60939 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN2BO60939 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SCN2BO60939 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN2BO60939 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.92■□□□□ 0.46
SCN2BO60939 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SCN2BO60939 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN2BO60939 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.92■□□□□ 0.46
SCN2BO60939 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN2BO60939 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.92■□□□□ 0.46
SCN2BO60939 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.91■□□□□ 0.46
SCN2BO60939 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.91■□□□□ 0.46
SCN2BO60939 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SCN2BO60939 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.91■□□□□ 0.46
SCN2BO60939 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCN2BO60939 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCN2BO60939 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.91■□□□□ 0.46
SCN2BO60939 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.91■□□□□ 0.46
SCN2BO60939 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.91■□□□□ 0.46
SCN2BO60939 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.91■□□□□ 0.46
SCN2BO60939 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.91■□□□□ 0.46
SCN2BO60939 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
SCN2BO60939 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.91■□□□□ 0.46
SCN2BO60939 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SCN2BO60939 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.91■□□□□ 0.46
SCN2BO60939 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCN2BO60939 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.91■□□□□ 0.46
SCN2BO60939 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN2BO60939 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
SCN2BO60939 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.91■□□□□ 0.46
SCN2BO60939 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCN2BO60939 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms