Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PLOD3O60568 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.82■□□□□ 0.44
PLOD3O60568 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PLOD3O60568 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PLOD3O60568 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.82■□□□□ 0.44
PLOD3O60568 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PLOD3O60568 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.82■□□□□ 0.44
PLOD3O60568 FAM197Y1-201ENST00000421178 764 ntBASIC17.82■□□□□ 0.44
PLOD3O60568 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.82■□□□□ 0.44
PLOD3O60568 AC091390.4-202ENST00000476426 537 ntBASIC17.82■□□□□ 0.44
PLOD3O60568 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.82■□□□□ 0.44
PLOD3O60568 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.82■□□□□ 0.44
PLOD3O60568 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.82■□□□□ 0.44
PLOD3O60568 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.82■□□□□ 0.44
PLOD3O60568 AC130371.2-201ENST00000619443 611 ntBASIC17.82■□□□□ 0.44
PLOD3O60568 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PLOD3O60568 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PLOD3O60568 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PLOD3O60568 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PLOD3O60568 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.82■□□□□ 0.44
PLOD3O60568 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PLOD3O60568 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PLOD3O60568 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PLOD3O60568 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PLOD3O60568 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.82■□□□□ 0.44
PLOD3O60568 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PLOD3O60568 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.81■□□□□ 0.44
PLOD3O60568 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PLOD3O60568 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.81■□□□□ 0.44
PLOD3O60568 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PLOD3O60568 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PLOD3O60568 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.81■□□□□ 0.44
PLOD3O60568 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PLOD3O60568 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 PRSS44-201ENST00000515154 1146 ntBASIC17.81■□□□□ 0.44
PLOD3O60568 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.81■□□□□ 0.44
PLOD3O60568 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.81■□□□□ 0.44
PLOD3O60568 AL049637.2-201ENST00000641778 930 ntBASIC17.81■□□□□ 0.44
PLOD3O60568 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PLOD3O60568 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
PLOD3O60568 AL049812.1-201ENST00000432563 2267 ntBASIC17.81■□□□□ 0.44
PLOD3O60568 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.8■□□□□ 0.44
PLOD3O60568 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PLOD3O60568 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.8■□□□□ 0.44
PLOD3O60568 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PLOD3O60568 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.8■□□□□ 0.44
PLOD3O60568 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PLOD3O60568 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.8■□□□□ 0.44
PLOD3O60568 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PLOD3O60568 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.8■□□□□ 0.44
PLOD3O60568 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PLOD3O60568 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.8■□□□□ 0.44
PLOD3O60568 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PLOD3O60568 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
PLOD3O60568 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.8■□□□□ 0.44
PLOD3O60568 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.8■□□□□ 0.44
PLOD3O60568 MIR6786-201ENST00000616843 113 ntBASIC17.8■□□□□ 0.44
PLOD3O60568 AC113410.3-201ENST00000623366 203 ntBASIC17.8■□□□□ 0.44
PLOD3O60568 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.8■□□□□ 0.44
PLOD3O60568 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.8■□□□□ 0.44
PLOD3O60568 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 FSCN1P1-201ENST00000568912 1481 ntBASIC17.8■□□□□ 0.44
PLOD3O60568 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 KRT8P11-201ENST00000409686 1436 ntBASIC17.8■□□□□ 0.44
PLOD3O60568 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PLOD3O60568 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PLOD3O60568 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.79■□□□□ 0.44
PLOD3O60568 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PLOD3O60568 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PLOD3O60568 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PLOD3O60568 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms