Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GMDSO60547 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GMDSO60547 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.71■□□□□ 0.27
GMDSO60547 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.71■□□□□ 0.27
GMDSO60547 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GMDSO60547 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.71■□□□□ 0.27
GMDSO60547 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GMDSO60547 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.71■□□□□ 0.27
GMDSO60547 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
GMDSO60547 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GMDSO60547 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GMDSO60547 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GMDSO60547 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.71■□□□□ 0.27
GMDSO60547 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.71■□□□□ 0.27
GMDSO60547 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GMDSO60547 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GMDSO60547 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.71■□□□□ 0.27
GMDSO60547 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GMDSO60547 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GMDSO60547 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.71■□□□□ 0.26
GMDSO60547 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GMDSO60547 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.7■□□□□ 0.26
GMDSO60547 NOC2LP2-201ENST00000407594 1944 ntBASIC16.7■□□□□ 0.26
GMDSO60547 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GMDSO60547 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GMDSO60547 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GMDSO60547 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GMDSO60547 AC068880.1-201ENST00000507289 2297 ntBASIC16.7■□□□□ 0.26
GMDSO60547 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.7■□□□□ 0.26
GMDSO60547 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.7■□□□□ 0.26
GMDSO60547 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GMDSO60547 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GMDSO60547 POU5F1P3-201ENST00000428824 1078 ntBASIC16.7■□□□□ 0.26
GMDSO60547 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.7■□□□□ 0.26
GMDSO60547 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.7■□□□□ 0.26
GMDSO60547 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.7■□□□□ 0.26
GMDSO60547 MTDHP1-201ENST00000605323 784 ntBASIC16.7■□□□□ 0.26
GMDSO60547 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GMDSO60547 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GMDSO60547 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GMDSO60547 ZNF815P-204ENST00000434898 1737 ntBASIC16.7■□□□□ 0.26
GMDSO60547 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.7■□□□□ 0.26
GMDSO60547 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GMDSO60547 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
GMDSO60547 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
GMDSO60547 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GMDSO60547 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.69■□□□□ 0.26
GMDSO60547 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.69■□□□□ 0.26
GMDSO60547 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.69■□□□□ 0.26
GMDSO60547 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.69■□□□□ 0.26
GMDSO60547 FAM201B-201ENST00000458407 597 ntBASIC16.69■□□□□ 0.26
GMDSO60547 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.69■□□□□ 0.26
GMDSO60547 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.69■□□□□ 0.26
GMDSO60547 AC006058.3-201ENST00000606217 1069 ntBASIC16.69■□□□□ 0.26
GMDSO60547 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GMDSO60547 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 BICD1-207ENST00000551848 1962 ntBASIC16.69■□□□□ 0.26
GMDSO60547 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GMDSO60547 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
GMDSO60547 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GMDSO60547 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.69■□□□□ 0.26
GMDSO60547 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.69■□□□□ 0.26
GMDSO60547 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GMDSO60547 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GMDSO60547 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GMDSO60547 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GMDSO60547 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GMDSO60547 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GMDSO60547 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GMDSO60547 AL354751.1-201ENST00000412768 1863 ntBASIC16.68■□□□□ 0.26
GMDSO60547 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
GMDSO60547 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GMDSO60547 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.68■□□□□ 0.26
GMDSO60547 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.68■□□□□ 0.26
GMDSO60547 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.68■□□□□ 0.26
GMDSO60547 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.68■□□□□ 0.26
GMDSO60547 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.68■□□□□ 0.26
GMDSO60547 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.68■□□□□ 0.26
GMDSO60547 AC004264.1-201ENST00000608354 794 ntBASIC16.68■□□□□ 0.26
GMDSO60547 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GMDSO60547 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
GMDSO60547 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.68■□□□□ 0.26
GMDSO60547 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms