Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 AP005242.2-201ENST00000580065 1175 ntBASIC16.84■□□□□ 0.29
TRAF3IP2O43734 MIR4497-201ENST00000583208 89 ntBASIC16.84■□□□□ 0.29
TRAF3IP2O43734 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 AC093827.2-201ENST00000512654 315 ntBASIC16.83■□□□□ 0.28
TRAF3IP2O43734 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 AIRN-201ENST00000601203 4374 ntBASIC16.83■□□□□ 0.28
TRAF3IP2O43734 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF3IP2O43734 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 KRT17P2-201ENST00000300992 1314 ntBASIC16.82■□□□□ 0.28
TRAF3IP2O43734 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 CRYGFP-201ENST00000418459 633 ntBASIC16.82■□□□□ 0.28
TRAF3IP2O43734 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF3IP2O43734 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms