Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KDELR3O43731 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDELR3O43731 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDELR3O43731 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDELR3O43731 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.17■□□□□ 0.66
KDELR3O43731 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDELR3O43731 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.17■□□□□ 0.66
KDELR3O43731 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.17■□□□□ 0.66
KDELR3O43731 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDELR3O43731 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KDELR3O43731 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.17■□□□□ 0.66
KDELR3O43731 AL138966.2-201ENST00000621997 464 ntBASIC19.17■□□□□ 0.66
KDELR3O43731 CR769767.2-201ENST00000622735 460 ntBASIC19.17■□□□□ 0.66
KDELR3O43731 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.17■□□□□ 0.66
KDELR3O43731 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDELR3O43731 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KDELR3O43731 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDELR3O43731 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
KDELR3O43731 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDELR3O43731 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KDELR3O43731 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.17■□□□□ 0.66
KDELR3O43731 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
KDELR3O43731 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.16■□□□□ 0.66
KDELR3O43731 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
KDELR3O43731 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.16■□□□□ 0.66
KDELR3O43731 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.16■□□□□ 0.66
KDELR3O43731 RCN1P1-201ENST00000400413 996 ntBASIC19.16■□□□□ 0.66
KDELR3O43731 ATP5G1P1-201ENST00000448724 379 ntBASIC19.16■□□□□ 0.66
KDELR3O43731 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.16■□□□□ 0.66
KDELR3O43731 WWOX-216ENST00000569818 525 ntBASIC19.16■□□□□ 0.66
KDELR3O43731 AC083906.6-201ENST00000641366 219 ntBASIC19.16■□□□□ 0.66
KDELR3O43731 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.16■□□□□ 0.66
KDELR3O43731 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
KDELR3O43731 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
KDELR3O43731 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.16■□□□□ 0.66
KDELR3O43731 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.16■□□□□ 0.66
KDELR3O43731 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.16■□□□□ 0.66
KDELR3O43731 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDELR3O43731 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.16■□□□□ 0.66
KDELR3O43731 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
KDELR3O43731 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.15■□□□□ 0.66
KDELR3O43731 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDELR3O43731 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDELR3O43731 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.15■□□□□ 0.66
KDELR3O43731 HEIH-201ENST00000623091 1652 ntBASIC19.15■□□□□ 0.66
KDELR3O43731 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.15■□□□□ 0.66
KDELR3O43731 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
KDELR3O43731 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDELR3O43731 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDELR3O43731 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDELR3O43731 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDELR3O43731 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.15■□□□□ 0.66
KDELR3O43731 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KDELR3O43731 MIR3180-5-201ENST00000583743 153 ntBASIC19.15■□□□□ 0.66
KDELR3O43731 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
KDELR3O43731 AC092865.7-201ENST00000641832 219 ntBASIC19.15■□□□□ 0.66
KDELR3O43731 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.15■□□□□ 0.66
KDELR3O43731 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.15■□□□□ 0.66
KDELR3O43731 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.15■□□□□ 0.66
KDELR3O43731 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDELR3O43731 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KDELR3O43731 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.15■□□□□ 0.66
KDELR3O43731 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.15■□□□□ 0.66
KDELR3O43731 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.15■□□□□ 0.66
KDELR3O43731 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDELR3O43731 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.15■□□□□ 0.66
KDELR3O43731 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.15■□□□□ 0.66
KDELR3O43731 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
KDELR3O43731 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
KDELR3O43731 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.14■□□□□ 0.66
KDELR3O43731 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.14■□□□□ 0.66
KDELR3O43731 AC008556.1-201ENST00000610908 2040 ntBASIC19.14■□□□□ 0.65
KDELR3O43731 AC006333.2-201ENST00000607957 2099 ntBASIC19.14■□□□□ 0.65
KDELR3O43731 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.14■□□□□ 0.65
KDELR3O43731 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.14■□□□□ 0.65
KDELR3O43731 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDELR3O43731 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDELR3O43731 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
KDELR3O43731 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDELR3O43731 AC141257.4-201ENST00000634557 245 ntBASIC19.14■□□□□ 0.65
KDELR3O43731 AC136944.6-201ENST00000634818 245 ntBASIC19.14■□□□□ 0.65
KDELR3O43731 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.14■□□□□ 0.65
KDELR3O43731 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.14■□□□□ 0.65
KDELR3O43731 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.14■□□□□ 0.65
KDELR3O43731 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDELR3O43731 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KDELR3O43731 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
KDELR3O43731 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms