Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SMAD9O15198 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD9O15198 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SMAD9O15198 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.16■□□□□ 0.34
SMAD9O15198 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.16■□□□□ 0.34
SMAD9O15198 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD9O15198 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
SMAD9O15198 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SMAD9O15198 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.16■□□□□ 0.34
SMAD9O15198 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.16■□□□□ 0.34
SMAD9O15198 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.16■□□□□ 0.34
SMAD9O15198 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.16■□□□□ 0.34
SMAD9O15198 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.16■□□□□ 0.34
SMAD9O15198 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.16■□□□□ 0.34
SMAD9O15198 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.16■□□□□ 0.34
SMAD9O15198 AC130371.2-201ENST00000619443 611 ntBASIC17.16■□□□□ 0.34
SMAD9O15198 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD9O15198 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.16■□□□□ 0.34
SMAD9O15198 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD9O15198 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD9O15198 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.16■□□□□ 0.34
SMAD9O15198 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMAD9O15198 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.16■□□□□ 0.34
SMAD9O15198 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD9O15198 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD9O15198 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD9O15198 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD9O15198 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.15■□□□□ 0.34
SMAD9O15198 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD9O15198 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.15■□□□□ 0.34
SMAD9O15198 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD9O15198 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD9O15198 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.15■□□□□ 0.34
SMAD9O15198 RBM17P1-201ENST00000453646 1190 ntBASIC17.15■□□□□ 0.34
SMAD9O15198 TSPY15P-201ENST00000457163 923 ntBASIC17.15■□□□□ 0.34
SMAD9O15198 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
SMAD9O15198 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.15■□□□□ 0.34
SMAD9O15198 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.15■□□□□ 0.34
SMAD9O15198 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SMAD9O15198 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.15■□□□□ 0.34
SMAD9O15198 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.15■□□□□ 0.34
SMAD9O15198 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.15■□□□□ 0.34
SMAD9O15198 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.15■□□□□ 0.34
SMAD9O15198 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMAD9O15198 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMAD9O15198 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD9O15198 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMAD9O15198 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SMAD9O15198 HTR7P1-202ENST00000624664 4411 ntBASIC17.14■□□□□ 0.34
SMAD9O15198 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMAD9O15198 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.14■□□□□ 0.33
SMAD9O15198 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.14■□□□□ 0.33
SMAD9O15198 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMAD9O15198 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.14■□□□□ 0.33
SMAD9O15198 FAM207BP-201ENST00000447172 505 ntBASIC17.14■□□□□ 0.33
SMAD9O15198 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.14■□□□□ 0.33
SMAD9O15198 DGCR10-201ENST00000609839 495 ntBASIC17.14■□□□□ 0.33
SMAD9O15198 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.14■□□□□ 0.33
SMAD9O15198 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.14■□□□□ 0.33
SMAD9O15198 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.14■□□□□ 0.33
SMAD9O15198 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMAD9O15198 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SMAD9O15198 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.14■□□□□ 0.33
SMAD9O15198 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMAD9O15198 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.13■□□□□ 0.33
SMAD9O15198 AL032819.2-201ENST00000624543 2162 ntBASIC17.13■□□□□ 0.33
SMAD9O15198 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.13■□□□□ 0.33
SMAD9O15198 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 AC026471.1-201ENST00000564629 3026 ntBASIC17.13■□□□□ 0.33
SMAD9O15198 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.13■□□□□ 0.33
SMAD9O15198 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMAD9O15198 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.13■□□□□ 0.33
SMAD9O15198 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms