Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CEP290O15078 KRT8P3-201ENST00000519669 1449 ntBASIC20.46■□□□□ 0.87
CEP290O15078 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CEP290O15078 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.46■□□□□ 0.87
CEP290O15078 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CEP290O15078 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CEP290O15078 MIR770-201ENST00000390219 98 ntBASIC20.46■□□□□ 0.87
CEP290O15078 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CEP290O15078 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.45■□□□□ 0.86
CEP290O15078 RBM17P3-201ENST00000417687 1192 ntBASIC20.45■□□□□ 0.86
CEP290O15078 AL645939.2-201ENST00000427340 991 ntBASIC20.45■□□□□ 0.86
CEP290O15078 AC011840.4-201ENST00000578471 627 ntBASIC20.45■□□□□ 0.86
CEP290O15078 AL096865.1-201ENST00000606796 927 ntBASIC20.45■□□□□ 0.86
CEP290O15078 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.45■□□□□ 0.86
CEP290O15078 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.45■□□□□ 0.86
CEP290O15078 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.45■□□□□ 0.86
CEP290O15078 POM121L3P-201ENST00000419331 1163 ntBASIC20.45■□□□□ 0.86
CEP290O15078 AC132008.2-207ENST00000454517 770 ntBASIC20.45■□□□□ 0.86
CEP290O15078 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.45■□□□□ 0.86
CEP290O15078 MIR3180-5-201ENST00000583743 153 ntBASIC20.45■□□□□ 0.86
CEP290O15078 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 MTDHP5-201ENST00000598980 586 ntBASIC20.45■□□□□ 0.86
CEP290O15078 AC106028.4-201ENST00000614509 607 ntBASIC20.45■□□□□ 0.86
CEP290O15078 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CEP290O15078 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.45■□□□□ 0.86
CEP290O15078 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.45■□□□□ 0.86
CEP290O15078 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.45■□□□□ 0.86
CEP290O15078 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.45■□□□□ 0.86
CEP290O15078 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.45■□□□□ 0.86
CEP290O15078 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CEP290O15078 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CEP290O15078 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.44■□□□□ 0.86
CEP290O15078 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CEP290O15078 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.44■□□□□ 0.86
CEP290O15078 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.44■□□□□ 0.86
CEP290O15078 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.44■□□□□ 0.86
CEP290O15078 AC009533.2-201ENST00000543664 586 ntBASIC20.44■□□□□ 0.86
CEP290O15078 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CEP290O15078 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.44■□□□□ 0.86
CEP290O15078 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CEP290O15078 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CEP290O15078 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CEP290O15078 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CEP290O15078 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.44■□□□□ 0.86
CEP290O15078 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.44■□□□□ 0.86
CEP290O15078 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.44■□□□□ 0.86
CEP290O15078 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.44■□□□□ 0.86
CEP290O15078 AC011467.4-201ENST00000594891 528 ntBASIC20.44■□□□□ 0.86
CEP290O15078 AL035252.4-201ENST00000624174 288 ntBASIC20.44■□□□□ 0.86
CEP290O15078 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CEP290O15078 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CEP290O15078 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CEP290O15078 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CEP290O15078 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CEP290O15078 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.43■□□□□ 0.86
CEP290O15078 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.43■□□□□ 0.86
CEP290O15078 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.43■□□□□ 0.86
CEP290O15078 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CEP290O15078 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CEP290O15078 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CEP290O15078 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.43■□□□□ 0.86
CEP290O15078 AC244015.2-201ENST00000616358 1861 ntBASIC20.43■□□□□ 0.86
CEP290O15078 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.43■□□□□ 0.86
CEP290O15078 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.43■□□□□ 0.86
CEP290O15078 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CEP290O15078 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CEP290O15078 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CEP290O15078 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.43■□□□□ 0.86
CEP290O15078 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.43■□□□□ 0.86
CEP290O15078 AP001269.4-201ENST00000609611 512 ntBASIC20.43■□□□□ 0.86
CEP290O15078 AC114341.1-201ENST00000618070 349 ntBASIC20.43■□□□□ 0.86
CEP290O15078 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
CEP290O15078 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 RPS2P1-201ENST00000434010 821 ntBASIC20.42■□□□□ 0.86
CEP290O15078 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CEP290O15078 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.42■□□□□ 0.86
CEP290O15078 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CEP290O15078 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CEP290O15078 GUSBP5-202ENST00000510805 1989 ntBASIC20.42■□□□□ 0.86
CEP290O15078 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CEP290O15078 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CEP290O15078 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms