Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB4O00305 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB4O00305 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.67■□□□□ 0.58
CACNB4O00305 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB4O00305 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB4O00305 NEK4P2-201ENST00000580004 1012 ntBASIC18.67■□□□□ 0.58
CACNB4O00305 AL023973.1-201ENST00000624619 620 ntBASIC18.67■□□□□ 0.58
CACNB4O00305 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB4O00305 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB4O00305 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CACNB4O00305 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CACNB4O00305 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB4O00305 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB4O00305 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB4O00305 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CACNB4O00305 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.67■□□□□ 0.58
CACNB4O00305 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CACNB4O00305 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNB4O00305 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNB4O00305 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNB4O00305 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CACNB4O00305 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNB4O00305 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CACNB4O00305 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNB4O00305 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNB4O00305 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.66■□□□□ 0.58
CACNB4O00305 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.66■□□□□ 0.58
CACNB4O00305 CR769767.2-201ENST00000622735 460 ntBASIC18.66■□□□□ 0.58
CACNB4O00305 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNB4O00305 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNB4O00305 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNB4O00305 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.66■□□□□ 0.58
CACNB4O00305 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 GPAT2P1-201ENST00000444924 1672 ntBASIC18.66■□□□□ 0.58
CACNB4O00305 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNB4O00305 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CACNB4O00305 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNB4O00305 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNB4O00305 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CACNB4O00305 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CACNB4O00305 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNB4O00305 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNB4O00305 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNB4O00305 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNB4O00305 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNB4O00305 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.65■□□□□ 0.58
CACNB4O00305 FAM8A6P-201ENST00000407496 1135 ntBASIC18.65■□□□□ 0.58
CACNB4O00305 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.65■□□□□ 0.58
CACNB4O00305 MCCD1P1-208ENST00000445732 328 ntBASIC18.65■□□□□ 0.58
CACNB4O00305 HOMER2P1-201ENST00000455653 964 ntBASIC18.65■□□□□ 0.58
CACNB4O00305 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CACNB4O00305 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNB4O00305 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNB4O00305 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNB4O00305 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNB4O00305 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNB4O00305 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.65■□□□□ 0.58
CACNB4O00305 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNB4O00305 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNB4O00305 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNB4O00305 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNB4O00305 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNB4O00305 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.65■□□□□ 0.58
CACNB4O00305 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.64■□□□□ 0.58
CACNB4O00305 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CACNB4O00305 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CACNB4O00305 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.64■□□□□ 0.58
CACNB4O00305 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNB4O00305 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.64■□□□□ 0.57
CACNB4O00305 AL023284.2-201ENST00000405850 579 ntBASIC18.64■□□□□ 0.57
CACNB4O00305 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CACNB4O00305 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.64■□□□□ 0.57
CACNB4O00305 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.64■□□□□ 0.57
CACNB4O00305 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.64■□□□□ 0.57
CACNB4O00305 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNB4O00305 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNB4O00305 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CACNB4O00305 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CACNB4O00305 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CACNB4O00305 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.64■□□□□ 0.57
CACNB4O00305 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms