Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.49■□□□□ 0.55
TAF4O00268 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TAF4O00268 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TAF4O00268 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TAF4O00268 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TAF4O00268 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.49■□□□□ 0.55
TAF4O00268 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.49■□□□□ 0.55
TAF4O00268 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.49■□□□□ 0.55
TAF4O00268 ZNF444P1-201ENST00000559497 298 ntBASIC18.49■□□□□ 0.55
TAF4O00268 AC111152.3-201ENST00000569699 673 ntBASIC18.49■□□□□ 0.55
TAF4O00268 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.49■□□□□ 0.55
TAF4O00268 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.49■□□□□ 0.55
TAF4O00268 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TAF4O00268 AL162377.1-201ENST00000618844 1793 ntBASIC18.49■□□□□ 0.55
TAF4O00268 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.49■□□□□ 0.55
TAF4O00268 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TAF4O00268 AP000974.1-201ENST00000623909 2387 ntBASIC18.49■□□□□ 0.55
TAF4O00268 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TAF4O00268 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TAF4O00268 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TAF4O00268 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TAF4O00268 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.49■□□□□ 0.55
TAF4O00268 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TAF4O00268 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.48■□□□□ 0.55
TAF4O00268 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.48■□□□□ 0.55
TAF4O00268 FAAHP1-202ENST00000446499 1238 ntBASIC18.48■□□□□ 0.55
TAF4O00268 AC112907.2-201ENST00000448639 330 ntBASIC18.48■□□□□ 0.55
TAF4O00268 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.48■□□□□ 0.55
TAF4O00268 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TAF4O00268 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.48■□□□□ 0.55
TAF4O00268 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
TAF4O00268 HYMAI.1-201ENST00000620949 238 ntBASIC18.48■□□□□ 0.55
TAF4O00268 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TAF4O00268 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
TAF4O00268 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 AC112907.3-201ENST00000577781 2400 ntBASIC18.48■□□□□ 0.55
TAF4O00268 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TAF4O00268 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.48■□□□□ 0.55
TAF4O00268 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TAF4O00268 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TAF4O00268 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.47■□□□□ 0.55
TAF4O00268 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TAF4O00268 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.47■□□□□ 0.55
TAF4O00268 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.47■□□□□ 0.55
TAF4O00268 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.47■□□□□ 0.55
TAF4O00268 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.47■□□□□ 0.55
TAF4O00268 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.47■□□□□ 0.55
TAF4O00268 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.47■□□□□ 0.55
TAF4O00268 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 KRT8P36-201ENST00000489121 1440 ntBASIC18.47■□□□□ 0.55
TAF4O00268 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TAF4O00268 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TAF4O00268 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.47■□□□□ 0.55
TAF4O00268 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.46■□□□□ 0.55
TAF4O00268 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TAF4O00268 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.46■□□□□ 0.55
TAF4O00268 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TAF4O00268 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.46■□□□□ 0.55
TAF4O00268 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
TAF4O00268 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TAF4O00268 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.46■□□□□ 0.55
TAF4O00268 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.46■□□□□ 0.55
TAF4O00268 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.46■□□□□ 0.55
TAF4O00268 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.46■□□□□ 0.55
TAF4O00268 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TAF4O00268 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.46■□□□□ 0.55
TAF4O00268 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TAF4O00268 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.46■□□□□ 0.55
TAF4O00268 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms