Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 AC079776.4-201ENST00000511039 504 ntBASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 AC091304.2-201ENST00000564639 760 ntBASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 LINC01711-201ENST00000598340 967 ntBASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 AC020907.5-201ENST00000624372 1936 ntBASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 KRT8P11-201ENST00000409686 1436 ntBASIC18.15■□□□□ 0.5
TRABD2BA6NFA1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRABD2BA6NFA1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 AC079781.3-201ENST00000449110 356 ntBASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 AL121772.3-201ENST00000610840 674 ntBASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.14■□□□□ 0.49
TRABD2BA6NFA1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 KRT8P26-201ENST00000534154 1276 ntBASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRABD2BA6NFA1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 MIR4674-201ENST00000582457 87 ntBASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRABD2BA6NFA1 KRT18P1-202ENST00000452408 1331 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms