Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 KRT18P23-201ENST00000435622 1283 ntBASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 HCG4P8-203ENST00000443049 980 ntBASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 HLA-F-220ENST00000434407 884 ntBASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144AA2RUR9 KRT8P7-201ENST00000533003 1432 ntBASIC27.15■■□□□ 1.94
CCDC144AA2RUR9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC144AA2RUR9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC27.15■■□□□ 1.94
CCDC144AA2RUR9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC27.15■■□□□ 1.94
CCDC144AA2RUR9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC27.15■■□□□ 1.94
CCDC144AA2RUR9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC144AA2RUR9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC144AA2RUR9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC144AA2RUR9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC27.15■■□□□ 1.94
CCDC144AA2RUR9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC144AA2RUR9 AC093484.2-201ENST00000580996 2166 ntBASIC27.14■■□□□ 1.94
CCDC144AA2RUR9 AL032819.2-201ENST00000624543 2162 ntBASIC27.14■■□□□ 1.94
CCDC144AA2RUR9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC144AA2RUR9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC27.14■■□□□ 1.94
CCDC144AA2RUR9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC27.14■■□□□ 1.94
CCDC144AA2RUR9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CCDC144AA2RUR9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.93
CCDC144AA2RUR9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CCDC144AA2RUR9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
CCDC144AA2RUR9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC27.14■■□□□ 1.93
CCDC144AA2RUR9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
CCDC144AA2RUR9 AL121894.2-201ENST00000602977 491 ntBASIC27.14■■□□□ 1.93
CCDC144AA2RUR9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC27.14■■□□□ 1.93
CCDC144AA2RUR9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC27.14■■□□□ 1.93
CCDC144AA2RUR9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 ATP5G2P1-201ENST00000433580 426 ntBASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 AC104390.1-201ENST00000555663 520 ntBASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 AL136038.4-201ENST00000603606 1261 ntBASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 AC010240.3-201ENST00000607688 395 ntBASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 NPAP1P7-201ENST00000613027 823 ntBASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 AC068587.9-201ENST00000641814 219 ntBASIC27.13■■□□□ 1.93
CCDC144AA2RUR9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC27.12■■□□□ 1.93
CCDC144AA2RUR9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 MIR564-202ENST00000385049 94 ntBASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 DUSP5P1-201ENST00000441325 1139 ntBASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 AC073130.3-201ENST00000624389 2278 ntBASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144AA2RUR9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms