Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 CLDN5-201ENST00000403084 2357 ntBASIC22.04■■□□□ 1.12
SSC5DA1L4H1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SSC5DA1L4H1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 REXO1L6P-202ENST00000619970 1078 ntBASIC22.03■■□□□ 1.12
SSC5DA1L4H1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SSC5DA1L4H1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 AP000593.1-201ENST00000393668 712 ntBASIC22.02■■□□□ 1.12
SSC5DA1L4H1 KRT8P7-201ENST00000533003 1432 ntBASIC22.02■■□□□ 1.12
SSC5DA1L4H1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC22.02■■□□□ 1.12
SSC5DA1L4H1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SSC5DA1L4H1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.02■■□□□ 1.11
SSC5DA1L4H1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SSC5DA1L4H1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 IGHGP-201ENST00000390555 1178 ntBASIC22.01■■□□□ 1.11
SSC5DA1L4H1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 SAPCD2P3-201ENST00000455031 850 ntBASIC22.01■■□□□ 1.11
SSC5DA1L4H1 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SSC5DA1L4H1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22■■□□□ 1.11
SSC5DA1L4H1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SSC5DA1L4H1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SSC5DA1L4H1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC22■■□□□ 1.11
SSC5DA1L4H1 PENK-208ENST00000523051 772 ntTSL 5 BASIC22■■□□□ 1.11
SSC5DA1L4H1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC22■■□□□ 1.11
SSC5DA1L4H1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
SSC5DA1L4H1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22■■□□□ 1.11
SSC5DA1L4H1 BX640515.1-201ENST00000617215 977 ntBASIC22■■□□□ 1.11
SSC5DA1L4H1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22■■□□□ 1.11
SSC5DA1L4H1 NME4-212ENST00000621774 904 ntTSL 3 BASIC22■■□□□ 1.11
SSC5DA1L4H1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SSC5DA1L4H1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22■■□□□ 1.11
SSC5DA1L4H1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SSC5DA1L4H1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22■■□□□ 1.11
SSC5DA1L4H1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 NSUN5P1-202ENST00000421140 1535 ntBASIC22■■□□□ 1.11
SSC5DA1L4H1 NSUN5P2-203ENST00000457352 1529 ntBASIC22■■□□□ 1.11
SSC5DA1L4H1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22■■□□□ 1.11
SSC5DA1L4H1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 Z69720.1-201ENST00000601483 472 ntBASIC21.99■■□□□ 1.11
SSC5DA1L4H1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms