Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV17A0A0B4J275 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAV17A0A0B4J275 RCC2P3-201ENST00000418112 1537 ntBASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 AC092329.2-201ENST00000598402 547 ntBASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 AL136038.4-201ENST00000603606 1261 ntBASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 AC092119.3-201ENST00000612618 583 ntBASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 AL157888.1-201ENST00000631930 593 ntBASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 AL512353.2-201ENST00000448759 1962 ntBASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV17A0A0B4J275 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 TREX1-205ENST00000625293 1783 ntBASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 HLA-F-220ENST00000434407 884 ntBASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 KRT18P23-201ENST00000435622 1283 ntBASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 MIR3652-201ENST00000579335 131 ntBASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 TEX21P-204ENST00000641479 1693 ntBASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV17A0A0B4J275 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 AL162741.1-201ENST00000565563 1558 ntBASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 AC093525.10-201ENST00000625130 1569 ntBASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV17A0A0B4J275 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV17A0A0B4J275 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms