Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 RNU6-902P-201ENST00000517212 91 ntBASIC6.46□□□□□ -1.38
SENP3Q9H4L4 MIR3935-201ENST00000583472 104 ntBASIC6.46□□□□□ -1.38
SENP3Q9H4L4 AC022513.1-201ENST00000624512 117 ntBASIC6.46□□□□□ -1.38
SENP3Q9H4L4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SENP3Q9H4L4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SENP3Q9H4L4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SENP3Q9H4L4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SENP3Q9H4L4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SENP3Q9H4L4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SENP3Q9H4L4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC6.45□□□□□ -1.38
SENP3Q9H4L4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SENP3Q9H4L4 RNA5SP513-201ENST00000364648 118 ntBASIC6.45□□□□□ -1.38
SENP3Q9H4L4 RNU6-1279P-201ENST00000383917 103 ntBASIC6.45□□□□□ -1.38
SENP3Q9H4L4 MIR7-3-201ENST00000384898 110 ntBASIC6.45□□□□□ -1.38
SENP3Q9H4L4 RN7SL517P-201ENST00000462240 305 ntBASIC6.45□□□□□ -1.38
SENP3Q9H4L4 TRAJ51-201ENST00000504127 63 ntBASIC6.45□□□□□ -1.38
SENP3Q9H4L4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SENP3Q9H4L4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SENP3Q9H4L4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.44□□□□□ -1.38
SENP3Q9H4L4 RNA5SP215-201ENST00000363440 122 ntBASIC6.44□□□□□ -1.38
SENP3Q9H4L4 RNU6-645P-201ENST00000364649 106 ntBASIC6.44□□□□□ -1.38
SENP3Q9H4L4 MIR634-201ENST00000385208 97 ntBASIC6.44□□□□□ -1.38
SENP3Q9H4L4 Y_RNA.809-201ENST00000516058 95 ntBASIC6.44□□□□□ -1.38
SENP3Q9H4L4 RN7SL600P-201ENST00000581811 299 ntBASIC6.44□□□□□ -1.38
SENP3Q9H4L4 MIR4251-201ENST00000635819 61 ntBASIC6.44□□□□□ -1.38
SENP3Q9H4L4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
SENP3Q9H4L4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SENP3Q9H4L4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SENP3Q9H4L4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SENP3Q9H4L4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SENP3Q9H4L4 RNU4-58P-201ENST00000363192 141 ntBASIC6.43□□□□□ -1.38
SENP3Q9H4L4 SUMO2P12-201ENST00000405924 140 ntBASIC6.43□□□□□ -1.38
SENP3Q9H4L4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.43□□□□□ -1.38
SENP3Q9H4L4 MTRNR2L2-201ENST00000604882 87 ntBASIC6.43□□□□□ -1.38
SENP3Q9H4L4 SCARNA4.1-201ENST00000628597 123 ntBASIC6.43□□□□□ -1.38
SENP3Q9H4L4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SENP3Q9H4L4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SENP3Q9H4L4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.42□□□□□ -1.38
SENP3Q9H4L4 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SENP3Q9H4L4 RNA5SP124-201ENST00000362739 110 ntBASIC6.42□□□□□ -1.38
SENP3Q9H4L4 MIR4491-201ENST00000581087 68 ntBASIC6.42□□□□□ -1.38
SENP3Q9H4L4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SENP3Q9H4L4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SENP3Q9H4L4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SENP3Q9H4L4 RNU6-53P-201ENST00000365367 106 ntBASIC6.41□□□□□ -1.38
SENP3Q9H4L4 MIR520C-201ENST00000385005 87 ntBASIC6.41□□□□□ -1.38
SENP3Q9H4L4 MIR545-201ENST00000385085 106 ntBASIC6.41□□□□□ -1.38
SENP3Q9H4L4 AC244023.1-201ENST00000426884 112 ntBASIC6.41□□□□□ -1.38
SENP3Q9H4L4 AL591623.2-201ENST00000449978 222 ntBASIC6.41□□□□□ -1.38
SENP3Q9H4L4 AC242498.1-201ENST00000604134 111 ntBASIC6.41□□□□□ -1.38
SENP3Q9H4L4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.41□□□□□ -1.38
SENP3Q9H4L4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC6.4□□□□□ -1.38
SENP3Q9H4L4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SENP3Q9H4L4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC6.4□□□□□ -1.38
SENP3Q9H4L4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC6.4□□□□□ -1.38
SENP3Q9H4L4 Y_RNA.536-201ENST00000384621 113 ntBASIC6.4□□□□□ -1.38
SENP3Q9H4L4 MIR449B-201ENST00000384995 97 ntBASIC6.4□□□□□ -1.38
SENP3Q9H4L4 RNU6-724P-201ENST00000390958 105 ntBASIC6.4□□□□□ -1.38
SENP3Q9H4L4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SENP3Q9H4L4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SENP3Q9H4L4 RNU6-1260P-201ENST00000362944 107 ntBASIC6.39□□□□□ -1.39
SENP3Q9H4L4 RNA5SP130-201ENST00000364431 114 ntBASIC6.39□□□□□ -1.39
SENP3Q9H4L4 RNU6-302P-201ENST00000365249 107 ntBASIC6.39□□□□□ -1.39
SENP3Q9H4L4 AC040958.1-201ENST00000561102 201 ntBASIC6.39□□□□□ -1.39
SENP3Q9H4L4 AC113403.1-201ENST00000604910 193 ntBASIC6.39□□□□□ -1.39
SENP3Q9H4L4 AC110741.2-201ENST00000605278 268 ntBASIC6.39□□□□□ -1.39
SENP3Q9H4L4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SENP3Q9H4L4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SENP3Q9H4L4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SENP3Q9H4L4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
SENP3Q9H4L4 AP001273.1-201ENST00000624493 3152 ntBASIC6.38□□□□□ -1.39
SENP3Q9H4L4 SNORA73.2-201ENST00000364946 201 ntBASIC6.38□□□□□ -1.39
SENP3Q9H4L4 MIR218-2-201ENST00000385006 110 ntBASIC6.38□□□□□ -1.39
SENP3Q9H4L4 MIR563-201ENST00000385080 79 ntBASIC6.38□□□□□ -1.39
SENP3Q9H4L4 SNORA26.7-201ENST00000391288 122 ntBASIC6.38□□□□□ -1.39
SENP3Q9H4L4 SNRPCP3-201ENST00000474888 476 ntBASIC6.38□□□□□ -1.39
SENP3Q9H4L4 GTF3AP2-201ENST00000557014 266 ntBASIC6.38□□□□□ -1.39
SENP3Q9H4L4 MIR7515-201ENST00000637837 67 ntBASIC6.38□□□□□ -1.39
SENP3Q9H4L4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.38□□□□□ -1.39
SENP3Q9H4L4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.38□□□□□ -1.39
SENP3Q9H4L4 AC131280.1-202ENST00000624067 4211 ntBASIC6.38□□□□□ -1.39
SENP3Q9H4L4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.38□□□□□ -1.39
SENP3Q9H4L4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SENP3Q9H4L4 SNORD100-201ENST00000408573 76 ntBASIC6.37□□□□□ -1.39
SENP3Q9H4L4 RPS29P12-201ENST00000460178 152 ntBASIC6.37□□□□□ -1.39
SENP3Q9H4L4 SNORA9.3-201ENST00000516383 129 ntBASIC6.37□□□□□ -1.39
SENP3Q9H4L4 SNORA25.16-201ENST00000516741 121 ntBASIC6.37□□□□□ -1.39
SENP3Q9H4L4 Y_RNA.697-201ENST00000516776 113 ntBASIC6.37□□□□□ -1.39
SENP3Q9H4L4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
SENP3Q9H4L4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SENP3Q9H4L4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SENP3Q9H4L4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SENP3Q9H4L4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SENP3Q9H4L4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SENP3Q9H4L4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SENP3Q9H4L4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SENP3Q9H4L4 MIR519A1-201ENST00000385257 85 ntBASIC6.36□□□□□ -1.39
SENP3Q9H4L4 SUB1P4-201ENST00000566062 339 ntBASIC6.36□□□□□ -1.39
SENP3Q9H4L4 AC015688.6-201ENST00000577737 104 ntBASIC6.36□□□□□ -1.39
SENP3Q9H4L4 RN7SL435P-201ENST00000584418 282 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms