Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA2O43364 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA2O43364 MIR423-201ENST00000362201 94 ntBASIC3.7□□□□□ -1.82
HOXA2O43364 RNA5SP42-201ENST00000364278 115 ntBASIC3.7□□□□□ -1.82
HOXA2O43364 RNU6-573P-201ENST00000383938 106 ntBASIC3.7□□□□□ -1.82
HOXA2O43364 Y_RNA.507-201ENST00000384500 99 ntBASIC3.7□□□□□ -1.82
HOXA2O43364 AL035398.1-201ENST00000430869 322 ntBASIC3.7□□□□□ -1.82
HOXA2O43364 AC018868.1-201ENST00000491307 315 ntBASIC3.7□□□□□ -1.82
HOXA2O43364 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA2O43364 RN7SKP83-201ENST00000516512 178 ntBASIC3.7□□□□□ -1.82
HOXA2O43364 RNU7-28P-201ENST00000516759 62 ntBASIC3.7□□□□□ -1.82
HOXA2O43364 AC078899.2-201ENST00000595282 212 ntBASIC3.7□□□□□ -1.82
HOXA2O43364 FAM71BP1-201ENST00000604431 523 ntBASIC3.7□□□□□ -1.82
HOXA2O43364 MIR4727-201ENST00000622232 55 ntBASIC3.7□□□□□ -1.82
HOXA2O43364 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA2O43364 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA2O43364 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA2O43364 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
HOXA2O43364 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA2O43364 ICE2P2-201ENST00000483823 2787 ntBASIC3.69□□□□□ -1.82
HOXA2O43364 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HOXA2O43364 AC093010.3-201ENST00000570269 15214 ntBASIC3.69□□□□□ -1.82
HOXA2O43364 MIR494-201ENST00000349529 81 ntBASIC3.69□□□□□ -1.82
HOXA2O43364 Y_RNA.10-201ENST00000362371 110 ntBASIC3.69□□□□□ -1.82
HOXA2O43364 SNORD114-6-201ENST00000364393 72 ntBASIC3.69□□□□□ -1.82
HOXA2O43364 RNU4-16P-201ENST00000364737 141 ntBASIC3.69□□□□□ -1.82
HOXA2O43364 SNX2P2-201ENST00000424553 323 ntBASIC3.69□□□□□ -1.82
HOXA2O43364 AC115115.1-201ENST00000449927 248 ntBASIC3.69□□□□□ -1.82
HOXA2O43364 RN7SL297P-201ENST00000483161 293 ntBASIC3.69□□□□□ -1.82
HOXA2O43364 Y_RNA.685-201ENST00000516532 108 ntBASIC3.69□□□□□ -1.82
HOXA2O43364 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXA2O43364 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HOXA2O43364 SNORD38C-201ENST00000384381 69 ntBASIC3.68□□□□□ -1.82
HOXA2O43364 AC245047.3-201ENST00000429428 127 ntBASIC3.68□□□□□ -1.82
HOXA2O43364 RPS26P15-201ENST00000488067 348 ntBASIC3.68□□□□□ -1.82
HOXA2O43364 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.68□□□□□ -1.82
HOXA2O43364 MIR5004-201ENST00000579078 107 ntBASIC3.68□□□□□ -1.82
HOXA2O43364 MIR4325-201ENST00000583049 90 ntBASIC3.68□□□□□ -1.82
HOXA2O43364 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
HOXA2O43364 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA2O43364 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA2O43364 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA2O43364 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
HOXA2O43364 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXA2O43364 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXA2O43364 AC245060.5-201ENST00000610778 3293 ntBASIC3.67□□□□□ -1.82
HOXA2O43364 MIR342-201ENST00000362212 99 ntBASIC3.67□□□□□ -1.82
HOXA2O43364 SNORA25B-201ENST00000365507 128 ntBASIC3.67□□□□□ -1.82
HOXA2O43364 Y_RNA.466-201ENST00000384294 113 ntBASIC3.67□□□□□ -1.82
HOXA2O43364 RNU6-1152P-201ENST00000384576 107 ntBASIC3.67□□□□□ -1.82
HOXA2O43364 SNORA48.2-201ENST00000390926 124 ntBASIC3.67□□□□□ -1.82
HOXA2O43364 RNU4-47P-201ENST00000410876 114 ntBASIC3.67□□□□□ -1.82
HOXA2O43364 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXA2O43364 AC002984.1-201ENST00000591692 448 ntBASIC3.67□□□□□ -1.82
HOXA2O43364 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA2O43364 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA2O43364 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA2O43364 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA2O43364 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA2O43364 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HOXA2O43364 RNU6-862P-201ENST00000362804 105 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 Y_RNA.219-201ENST00000364232 113 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 RNU6-1072P-201ENST00000384703 107 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 RNU6-443P-201ENST00000384780 107 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 MIR128-1-201ENST00000384921 82 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 Y_RNA.601-201ENST00000410500 113 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 RN7SKP200-201ENST00000410564 320 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 RNU6-592P-201ENST00000411333 103 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 RHEBP3-201ENST00000411920 351 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA2O43364 AC003685.2-201ENST00000422795 395 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA2O43364 RNU6-893P-201ENST00000458841 100 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.66□□□□□ -1.82
HOXA2O43364 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA2O43364 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA2O43364 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
HOXA2O43364 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HOXA2O43364 RN7SKP220-201ENST00000410611 288 ntBASIC3.65□□□□□ -1.83
HOXA2O43364 AL022718.1-201ENST00000412004 84 ntBASIC3.65□□□□□ -1.83
HOXA2O43364 Z96811.1-201ENST00000445880 108 ntBASIC3.65□□□□□ -1.83
HOXA2O43364 AC026333.2-201ENST00000542164 106 ntBASIC3.65□□□□□ -1.83
HOXA2O43364 HSPE1P19-201ENST00000603327 295 ntBASIC3.65□□□□□ -1.83
HOXA2O43364 MIR486-1-201ENST00000612171 68 ntBASIC3.65□□□□□ -1.83
HOXA2O43364 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
HOXA2O43364 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA2O43364 RNU6-661P-201ENST00000362409 107 ntBASIC3.64□□□□□ -1.83
HOXA2O43364 RNU6-220P-201ENST00000390919 107 ntBASIC3.64□□□□□ -1.83
HOXA2O43364 SNORA26.7-201ENST00000391288 122 ntBASIC3.64□□□□□ -1.83
HOXA2O43364 AC109327.2-201ENST00000448339 378 ntBASIC3.64□□□□□ -1.83
HOXA2O43364 RPL23AP67-201ENST00000465341 474 ntBASIC3.64□□□□□ -1.83
HOXA2O43364 RN7SL504P-201ENST00000494496 287 ntBASIC3.64□□□□□ -1.83
HOXA2O43364 AC113410.1-201ENST00000505029 247 ntBASIC3.64□□□□□ -1.83
HOXA2O43364 SNORA70.19-201ENST00000516717 90 ntBASIC3.64□□□□□ -1.83
HOXA2O43364 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXA2O43364 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
HOXA2O43364 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HOXA2O43364 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA2O43364 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXA2O43364 RNU6-1099P-201ENST00000363533 107 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms