Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 CENPCP1-201ENST00000533085 2578 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 MIR340-201ENST00000362125 95 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 RNU1-23P-201ENST00000363361 144 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-674P-201ENST00000363831 107 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-407P-201ENST00000365280 104 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 RNU4-11P-201ENST00000365287 132 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 RNU4-43P-201ENST00000410628 137 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 SUMO1P4-201ENST00000429430 302 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 HMGN2P18-201ENST00000450680 270 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 AL137159.1-201ENST00000452808 512 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 RNU7-197P-201ENST00000458836 62 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-948P-201ENST00000516374 107 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 RNU2-34P-201ENST00000516534 121 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-63P-201ENST00000516690 95 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 AC015720.1-201ENST00000565251 277 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 AC005972.2-201ENST00000604690 348 ntBASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-376P-201ENST00000384731 106 ntBASIC2.42□□□□□ -2.02
SLC44A3Q8N4M1 RN7SKP101-201ENST00000411376 320 ntBASIC2.42□□□□□ -2.02
SLC44A3Q8N4M1 SNORA48.11-201ENST00000517015 89 ntBASIC2.42□□□□□ -2.02
SLC44A3Q8N4M1 POLR3GP1-201ENST00000594073 261 ntBASIC2.42□□□□□ -2.02
SLC44A3Q8N4M1 AC091895.1-201ENST00000624494 256 ntBASIC2.42□□□□□ -2.02
SLC44A3Q8N4M1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SLC44A3Q8N4M1 AC010332.2-201ENST00000613083 1904 ntBASIC2.42□□□□□ -2.02
SLC44A3Q8N4M1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 Y_RNA.337-201ENST00000365312 102 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 DEFA7P-201ENST00000382676 285 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 RNY3P5-201ENST00000384127 102 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 RNU2-32P-201ENST00000411193 191 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 MTATP6P29-201ENST00000415057 132 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 AC008134.1-201ENST00000420943 193 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 AL357134.1-201ENST00000445848 426 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-437P-201ENST00000459408 95 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 RNA5SP458-201ENST00000516188 119 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 RNU7-116P-201ENST00000516940 62 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 RNA5SP490-201ENST00000517141 136 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 AC027419.1-201ENST00000522976 328 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 AL356280.1-201ENST00000603614 379 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 AC100821.1-201ENST00000523153 2479 ntBASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SLC44A3Q8N4M1 MIR6073-201ENST00000352083 89 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 RNU1-22P-201ENST00000363334 158 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-546P-201ENST00000383991 107 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-1168P-201ENST00000390831 104 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 RNA5SP511-201ENST00000410487 115 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 AC006461.1-201ENST00000412637 326 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 MTND4LP9-201ENST00000427694 174 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 AL161788.1-201ENST00000441805 169 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 AL121914.1-201ENST00000450188 156 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 HMGN2P23-201ENST00000456759 269 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 AC093259.1-201ENST00000509755 300 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 SNORA25.12-201ENST00000516202 82 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 AL365222.1-201ENST00000614661 98 ntBASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SLC44A3Q8N4M1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 SNORD45.3-201ENST00000363836 72 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-1240P-201ENST00000365155 104 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-728P-201ENST00000365375 104 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 SNORA22C-201ENST00000384614 134 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 SNORA64-201ENST00000384674 134 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 RPL23AP54-201ENST00000495129 419 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 CKS1BP2-201ENST00000497342 240 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 AC097462.1-201ENST00000514125 324 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-856P-201ENST00000516959 98 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 MIR5007-201ENST00000583098 95 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 MIR5739-201ENST00000619803 80 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 ZNF702P-202ENST00000434269 1966 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 ZNF271P-202ENST00000465539 1970 ntBASIC2.39□□□□□ -2.03
SLC44A3Q8N4M1 RNY1P11-201ENST00000363759 113 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 Y_RNA.218-201ENST00000364218 104 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-438P-201ENST00000365561 103 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-768P-201ENST00000384683 107 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 SNORA40-201ENST00000388090 126 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 RNU6-220P-201ENST00000390919 107 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 RPL30P13-201ENST00000418873 348 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 AC245102.2-201ENST00000448956 180 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 RPL23AP42-201ENST00000471152 471 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 AC018868.1-201ENST00000491307 315 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 AC023141.11-201ENST00000508864 202 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 AL049779.4-201ENST00000604500 156 ntBASIC2.38□□□□□ -2.03
SLC44A3Q8N4M1 U2.20-201ENST00000613956 192 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms