Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 HSPE1P21-201ENST00000438283 308 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 snoU13.18-201ENST00000459483 104 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 RNU6-1333P-201ENST00000516162 93 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 RNU7-116P-201ENST00000516940 62 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 AC079598.5-201ENST00000547460 117 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 MIR548AY-201ENST00000617669 107 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 Y_RNA.293-201ENST00000364908 93 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 MIR548B-201ENST00000385247 97 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 RNU6-383P-201ENST00000410864 94 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 AL161651.1-201ENST00000440882 223 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 RNU7-197P-201ENST00000458836 62 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.43□□□□□ -2.02
POLR2AP24928 AC007536.1-201ENST00000533382 349 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 MIR4753-201ENST00000585119 83 ntBASIC2.43□□□□□ -2.02
POLR2AP24928 FAM35CP-201ENST00000554755 2470 ntBASIC2.42□□□□□ -2.02
POLR2AP24928 RNU6-1205P-201ENST00000363625 106 ntBASIC2.42□□□□□ -2.02
POLR2AP24928 RNU6-1305P-201ENST00000364353 104 ntBASIC2.42□□□□□ -2.02
POLR2AP24928 Y_RNA.251-201ENST00000364551 99 ntBASIC2.42□□□□□ -2.02
POLR2AP24928 Y_RNA.353-201ENST00000365440 108 ntBASIC2.42□□□□□ -2.02
POLR2AP24928 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
POLR2AP24928 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.42□□□□□ -2.02
POLR2AP24928 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.42□□□□□ -2.02
POLR2AP24928 AC018630.3-201ENST00000542637 96 ntBASIC2.42□□□□□ -2.02
POLR2AP24928 AL021707.8-201ENST00000609428 183 ntBASIC2.42□□□□□ -2.02
POLR2AP24928 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
POLR2AP24928 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
POLR2AP24928 MIR9-3-201ENST00000385084 90 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 MIR300-201ENST00000401138 83 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 U6atac.2-201ENST00000408644 118 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 RNU6-1077P-201ENST00000410506 102 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 SNRPGP8-201ENST00000454064 226 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 AC093259.1-201ENST00000509755 300 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.41□□□□□ -2.02
POLR2AP24928 RNU1-117P-201ENST00000517041 158 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 AC090049.2-201ENST00000550377 109 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 MIR5002-201ENST00000584713 97 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 TUG1_4.1-201ENST00000619464 181 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.41□□□□□ -2.02
POLR2AP24928 AC007256.1-201ENST00000392253 2765 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 MAPK10-266ENST00000641066 6555 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 Y_RNA.124-201ENST00000363339 93 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 SNORD31B-201ENST00000364977 69 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 RNU4-11P-201ENST00000365287 132 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 Y_RNA.337-201ENST00000365312 102 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.41□□□□□ -2.02
POLR2AP24928 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 AC117454.1-201ENST00000491120 168 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 RNU6-126P-201ENST00000516685 103 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 RNU6-965P-201ENST00000516721 96 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 SCARNA11.3-201ENST00000517276 130 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 AL365205.2-201ENST00000594586 68 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 AC107294.3-201ENST00000609211 526 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 uc_338.4-201ENST00000616635 176 ntBASIC2.41□□□□□ -2.02
POLR2AP24928 U8.7-201ENST00000364940 136 ntBASIC2.4□□□□□ -2.02
POLR2AP24928 SNORA26.7-201ENST00000391288 122 ntBASIC2.4□□□□□ -2.02
POLR2AP24928 RPS27P22-201ENST00000478056 241 ntBASIC2.4□□□□□ -2.02
POLR2AP24928 RNA5SP20-201ENST00000515976 84 ntBASIC2.4□□□□□ -2.02
POLR2AP24928 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.4□□□□□ -2.02
POLR2AP24928 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.4□□□□□ -2.02
POLR2AP24928 AL356280.1-201ENST00000603614 379 ntBASIC2.4□□□□□ -2.02
POLR2AP24928 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
POLR2AP24928 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
POLR2AP24928 SNORA14A-201ENST00000364773 135 ntBASIC2.4□□□□□ -2.03
POLR2AP24928 RNU6-1240P-201ENST00000365155 104 ntBASIC2.4□□□□□ -2.03
POLR2AP24928 DYNLT3P1-201ENST00000378574 347 ntBASIC2.4□□□□□ -2.03
POLR2AP24928 RNU6-1080P-201ENST00000383982 107 ntBASIC2.4□□□□□ -2.03
POLR2AP24928 RNU6-1228P-201ENST00000391014 107 ntBASIC2.4□□□□□ -2.03
POLR2AP24928 RNU6-460P-201ENST00000391158 108 ntBASIC2.4□□□□□ -2.03
POLR2AP24928 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
POLR2AP24928 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.4□□□□□ -2.03
POLR2AP24928 SNORD11-201ENST00000459124 84 ntBASIC2.4□□□□□ -2.03
POLR2AP24928 AC145146.1-201ENST00000496370 254 ntBASIC2.4□□□□□ -2.03
POLR2AP24928 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.4□□□□□ -2.03
POLR2AP24928 MIR4303-201ENST00000581299 66 ntBASIC2.4□□□□□ -2.03
POLR2AP24928 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.4□□□□□ -2.03
POLR2AP24928 RPL30P11-203ENST00000598995 310 ntBASIC2.4□□□□□ -2.03
POLR2AP24928 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
POLR2AP24928 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
POLR2AP24928 Y_RNA.24-201ENST00000362508 103 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 RNU6-153P-201ENST00000364422 104 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 RNU6-117P-201ENST00000365415 107 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.39□□□□□ -2.03
POLR2AP24928 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
POLR2AP24928 RNU6-561P-201ENST00000516222 102 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 RNU6-365P-201ENST00000517113 106 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 AC133485.4-201ENST00000561835 220 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 AC138907.4-201ENST00000570107 226 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 AC131055.1-201ENST00000584626 316 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 MIR4506-201ENST00000584693 77 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 AL365222.1-201ENST00000614661 98 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 AC002064.3-201ENST00000623448 346 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 AP001340.1-201ENST00000624405 217 ntBASIC2.39□□□□□ -2.03
POLR2AP24928 Y_RNA.332-201ENST00000365271 113 ntBASIC2.38□□□□□ -2.03
POLR2AP24928 RNA5SP496-201ENST00000391240 109 ntBASIC2.38□□□□□ -2.03
POLR2AP24928 FO393413.1-201ENST00000402892 195 ntBASIC2.38□□□□□ -2.03
POLR2AP24928 AP000567.1-201ENST00000406413 156 ntBASIC2.38□□□□□ -2.03
POLR2AP24928 AP1B1P2-201ENST00000416196 106 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms