Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 HMGN2P34-201ENST00000437647 269 ntBASIC3.57□□□□□ -1.84
PTCD1O75127 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
PTCD1O75127 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.57□□□□□ -1.84
PTCD1O75127 AC009831.4-201ENST00000620744 325 ntBASIC3.57□□□□□ -1.84
PTCD1O75127 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
PTCD1O75127 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTCD1O75127 RNU6-766P-201ENST00000362478 107 ntBASIC3.56□□□□□ -1.84
PTCD1O75127 Y_RNA.332-201ENST00000365271 113 ntBASIC3.56□□□□□ -1.84
PTCD1O75127 Y_RNA.346-201ENST00000365385 112 ntBASIC3.56□□□□□ -1.84
PTCD1O75127 RNU6-756P-201ENST00000383997 107 ntBASIC3.56□□□□□ -1.84
PTCD1O75127 Y_RNA.432-201ENST00000384087 111 ntBASIC3.56□□□□□ -1.84
PTCD1O75127 Y_RNA.558-201ENST00000384685 113 ntBASIC3.56□□□□□ -1.84
PTCD1O75127 RPS4XP11-201ENST00000446897 772 ntBASIC3.56□□□□□ -1.84
PTCD1O75127 AC104984.5-201ENST00000586878 94 ntBASIC3.56□□□□□ -1.84
PTCD1O75127 AL022345.2-201ENST00000606307 135 ntBASIC3.56□□□□□ -1.84
PTCD1O75127 MIR6817-201ENST00000615588 66 ntBASIC3.56□□□□□ -1.84
PTCD1O75127 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PTCD1O75127 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.56□□□□□ -1.84
PTCD1O75127 AC103988.1-201ENST00000566382 2177 ntBASIC3.56□□□□□ -1.84
PTCD1O75127 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.56□□□□□ -1.84
PTCD1O75127 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
PTCD1O75127 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCD1O75127 Y_RNA.52-201ENST00000362760 96 ntBASIC3.55□□□□□ -1.84
PTCD1O75127 RNY1P7-201ENST00000384743 110 ntBASIC3.55□□□□□ -1.84
PTCD1O75127 AC244505.4-201ENST00000434905 287 ntBASIC3.55□□□□□ -1.84
PTCD1O75127 SSXP5-201ENST00000443473 287 ntBASIC3.55□□□□□ -1.84
PTCD1O75127 AL513328.1-201ENST00000446460 224 ntBASIC3.55□□□□□ -1.84
PTCD1O75127 AC008413.1-201ENST00000511864 177 ntBASIC3.55□□□□□ -1.84
PTCD1O75127 RNA5SP148-201ENST00000516527 94 ntBASIC3.55□□□□□ -1.84
PTCD1O75127 RNU6-856P-201ENST00000516959 98 ntBASIC3.55□□□□□ -1.84
PTCD1O75127 RPL23AP91-201ENST00000569211 455 ntBASIC3.55□□□□□ -1.84
PTCD1O75127 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCD1O75127 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCD1O75127 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCD1O75127 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PTCD1O75127 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTCD1O75127 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCD1O75127 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCD1O75127 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCD1O75127 Y_RNA.163-201ENST00000363702 113 ntBASIC3.54□□□□□ -1.84
PTCD1O75127 Y_RNA.203-201ENST00000364106 102 ntBASIC3.54□□□□□ -1.84
PTCD1O75127 MIR561-201ENST00000385216 97 ntBASIC3.54□□□□□ -1.84
PTCD1O75127 RNU6-220P-201ENST00000390919 107 ntBASIC3.54□□□□□ -1.84
PTCD1O75127 MIR1263-201ENST00000408324 86 ntBASIC3.54□□□□□ -1.84
PTCD1O75127 RPL39P40-201ENST00000445481 146 ntBASIC3.54□□□□□ -1.84
PTCD1O75127 UQCRHP3-201ENST00000451503 251 ntBASIC3.54□□□□□ -1.84
PTCD1O75127 AC023449.1-201ENST00000454464 154 ntBASIC3.54□□□□□ -1.84
PTCD1O75127 RNU6-667P-201ENST00000517186 102 ntBASIC3.54□□□□□ -1.84
PTCD1O75127 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCD1O75127 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCD1O75127 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.54□□□□□ -1.84
PTCD1O75127 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCD1O75127 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PTCD1O75127 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PTCD1O75127 Y_RNA.85-201ENST00000363014 111 ntBASIC3.53□□□□□ -1.84
PTCD1O75127 MIR512-1-201ENST00000384913 84 ntBASIC3.53□□□□□ -1.84
PTCD1O75127 RNU6-1186P-201ENST00000410429 97 ntBASIC3.53□□□□□ -1.84
PTCD1O75127 RNU2-48P-201ENST00000410694 191 ntBASIC3.53□□□□□ -1.84
PTCD1O75127 AC060773.1-201ENST00000421698 310 ntBASIC3.53□□□□□ -1.84
PTCD1O75127 CALM2P4-201ENST00000430810 426 ntBASIC3.53□□□□□ -1.84
PTCD1O75127 AC011604.1-201ENST00000545978 196 ntBASIC3.53□□□□□ -1.84
PTCD1O75127 MIR2681-201ENST00000581814 105 ntBASIC3.53□□□□□ -1.84
PTCD1O75127 U2.20-201ENST00000613956 192 ntBASIC3.53□□□□□ -1.84
PTCD1O75127 AL035470.1-201ENST00000622571 220 ntBASIC3.53□□□□□ -1.84
PTCD1O75127 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PTCD1O75127 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTCD1O75127 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PTCD1O75127 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PTCD1O75127 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTCD1O75127 SNORA51.5-201ENST00000384126 131 ntBASIC3.52□□□□□ -1.85
PTCD1O75127 SNORD12C-201ENST00000386307 89 ntBASIC3.52□□□□□ -1.85
PTCD1O75127 Y_RNA.621-201ENST00000411065 96 ntBASIC3.52□□□□□ -1.85
PTCD1O75127 RNU6-1299P-201ENST00000516316 100 ntBASIC3.52□□□□□ -1.85
PTCD1O75127 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.52□□□□□ -1.85
PTCD1O75127 AC007012.1-201ENST00000567192 175 ntBASIC3.52□□□□□ -1.85
PTCD1O75127 ZNF861P-201ENST00000588126 639 ntBASIC3.52□□□□□ -1.85
PTCD1O75127 U6.73-201ENST00000619194 103 ntBASIC3.52□□□□□ -1.85
PTCD1O75127 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.52□□□□□ -1.85
PTCD1O75127 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTCD1O75127 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTCD1O75127 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTCD1O75127 MIR148B-201ENST00000362252 99 ntBASIC3.51□□□□□ -1.85
PTCD1O75127 MIR592-201ENST00000384959 97 ntBASIC3.51□□□□□ -1.85
PTCD1O75127 RN7SL75P-201ENST00000461926 281 ntBASIC3.51□□□□□ -1.85
PTCD1O75127 RN7SKP43-201ENST00000516173 320 ntBASIC3.51□□□□□ -1.85
PTCD1O75127 RNU6-1146P-201ENST00000516282 102 ntBASIC3.51□□□□□ -1.85
PTCD1O75127 AL160236.1-201ENST00000556317 195 ntBASIC3.51□□□□□ -1.85
PTCD1O75127 AC073413.2-201ENST00000604332 360 ntBASIC3.51□□□□□ -1.85
PTCD1O75127 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PTCD1O75127 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PTCD1O75127 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTCD1O75127 MIR340-201ENST00000362125 95 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 Y_RNA.634-201ENST00000364811 113 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 RNA5SP125-201ENST00000364843 120 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 SNORD18B-201ENST00000365659 72 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 Y_RNA.528-201ENST00000384575 108 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 RNU6-440P-201ENST00000390882 105 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 MIR887-201ENST00000401258 79 ntBASIC3.5□□□□□ -1.85
PTCD1O75127 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.5□□□□□ -1.85
PTCD1O75127 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms