Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SNORA59A-201ENST00000459326 152 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 HMGN1P7-201ENST00000491722 313 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 RN7SKP57-201ENST00000517248 293 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 MIR3618-201ENST00000580330 88 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 MIR4438-201ENST00000585271 93 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 YPEL5P2-201ENST00000605553 359 ntBASIC3.36□□□□□ -1.87
CHRNA4P43681 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRNA4P43681 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA4P43681 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRNA4P43681 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CHRNA4P43681 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHRNA4P43681 RNU6-661P-201ENST00000362409 107 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 RNU6-363P-201ENST00000362895 105 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 RNU6-1189P-201ENST00000383958 107 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 SNORA18-201ENST00000384416 132 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 MIR147B-201ENST00000390185 80 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 RNU6-887P-201ENST00000410660 100 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 RNU6-733P-201ENST00000410759 104 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.35□□□□□ -1.87
CHRNA4P43681 RNU1-131P-201ENST00000458943 161 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 RPS29P21-201ENST00000496272 170 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 RNU2-35P-201ENST00000516446 142 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 Y_RNA.705-201ENST00000516862 110 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 RNU6-1096P-201ENST00000517089 102 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 HIGD1AP1-201ENST00000550979 275 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.35□□□□□ -1.87
CHRNA4P43681 MIR3200-201ENST00000580767 85 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 MIR4276-201ENST00000584832 70 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 AC087741.2-201ENST00000619415 172 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 U6.105-201ENST00000637379 88 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.35□□□□□ -1.87
CHRNA4P43681 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHRNA4P43681 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHRNA4P43681 AC017071.1-201ENST00000564407 2204 ntBASIC3.35□□□□□ -1.87
CHRNA4P43681 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.35□□□□□ -1.87
CHRNA4P43681 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.35□□□□□ -1.87
CHRNA4P43681 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHRNA4P43681 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.34□□□□□ -1.87
CHRNA4P43681 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.34□□□□□ -1.87
CHRNA4P43681 Y_RNA.155-201ENST00000363632 101 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 RNU1-33P-201ENST00000364249 162 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 SNORD45B-201ENST00000364617 72 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 RNU6-409P-201ENST00000384114 104 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 RNU6-1235P-201ENST00000384559 107 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 Y_RNA.611-201ENST00000410682 108 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.34□□□□□ -1.87
CHRNA4P43681 CYCSP35-201ENST00000451978 304 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 RNU6-498P-201ENST00000459468 107 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 RNU6-948P-201ENST00000516374 107 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 RNU6-1006P-201ENST00000516998 103 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 MIR5195-201ENST00000583555 115 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.34□□□□□ -1.87
CHRNA4P43681 AC091304.10-201ENST00000641554 121 ntBASIC3.34□□□□□ -1.87
CHRNA4P43681 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.34□□□□□ -1.87
CHRNA4P43681 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.34□□□□□ -1.87
CHRNA4P43681 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHRNA4P43681 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHRNA4P43681 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CHRNA4P43681 AC002546.1-201ENST00000588041 2504 ntBASIC3.34□□□□□ -1.88
CHRNA4P43681 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHRNA4P43681 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHRNA4P43681 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.33□□□□□ -1.88
CHRNA4P43681 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHRNA4P43681 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
CHRNA4P43681 Y_RNA.4-201ENST00000362333 112 ntBASIC3.33□□□□□ -1.88
CHRNA4P43681 Y_RNA.94-201ENST00000363068 106 ntBASIC3.33□□□□□ -1.88
CHRNA4P43681 RNU1-96P-201ENST00000364163 162 ntBASIC3.33□□□□□ -1.88
CHRNA4P43681 MIR183-201ENST00000384958 110 ntBASIC3.33□□□□□ -1.88
CHRNA4P43681 MIR520G-201ENST00000385064 90 ntBASIC3.33□□□□□ -1.88
CHRNA4P43681 Z92545.1-201ENST00000411782 234 ntBASIC3.33□□□□□ -1.88
CHRNA4P43681 RNU1-61P-201ENST00000516107 151 ntBASIC3.33□□□□□ -1.88
CHRNA4P43681 RNU7-70P-201ENST00000516941 66 ntBASIC3.33□□□□□ -1.88
CHRNA4P43681 MIR3186-201ENST00000577404 85 ntBASIC3.33□□□□□ -1.88
CHRNA4P43681 AC087685.1-201ENST00000587507 141 ntBASIC3.33□□□□□ -1.88
CHRNA4P43681 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.33□□□□□ -1.88
CHRNA4P43681 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CHRNA4P43681 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CHRNA4P43681 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHRNA4P43681 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHRNA4P43681 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHRNA4P43681 Y_RNA.95-201ENST00000363079 95 ntBASIC3.32□□□□□ -1.88
CHRNA4P43681 Y_RNA.253-201ENST00000364562 112 ntBASIC3.32□□□□□ -1.88
CHRNA4P43681 Y_RNA.316-201ENST00000365118 111 ntBASIC3.32□□□□□ -1.88
CHRNA4P43681 RNA5SP229-201ENST00000410809 99 ntBASIC3.32□□□□□ -1.88
CHRNA4P43681 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.32□□□□□ -1.88
CHRNA4P43681 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.32□□□□□ -1.88
CHRNA4P43681 RPS12P18-201ENST00000442381 270 ntBASIC3.32□□□□□ -1.88
CHRNA4P43681 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
CHRNA4P43681 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
CHRNA4P43681 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.32□□□□□ -1.88
CHRNA4P43681 AC073413.2-201ENST00000604332 360 ntBASIC3.32□□□□□ -1.88
CHRNA4P43681 uc_338.1-201ENST00000612113 180 ntBASIC3.32□□□□□ -1.88
CHRNA4P43681 MIR1255B1-201ENST00000636325 63 ntBASIC3.32□□□□□ -1.88
CHRNA4P43681 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.32□□□□□ -1.88
CHRNA4P43681 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CHRNA4P43681 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHRNA4P43681 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA4P43681 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA4P43681 RNU4-67P-201ENST00000364569 141 ntBASIC3.31□□□□□ -1.88
CHRNA4P43681 SNORD31B-201ENST00000364977 69 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms