Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC107083.1-201ENST00000439643 279 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.14□□□□□ -1.91
PRPF40AO75400 RNU7-128P-201ENST00000517247 62 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 AL031274.2-201ENST00000599419 203 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 MIR7106-201ENST00000612419 65 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 AC022202.1-201ENST00000613515 211 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 JPX_2.1-201ENST00000614161 69 ntBASIC3.14□□□□□ -1.91
PRPF40AO75400 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.14□□□□□ -1.91
PRPF40AO75400 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.14□□□□□ -1.91
PRPF40AO75400 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.13□□□□□ -1.91
PRPF40AO75400 RNU6-862P-201ENST00000362804 105 ntBASIC3.13□□□□□ -1.91
PRPF40AO75400 RNU6-1164P-201ENST00000364428 107 ntBASIC3.13□□□□□ -1.91
PRPF40AO75400 RNU6-643P-201ENST00000384018 107 ntBASIC3.13□□□□□ -1.91
PRPF40AO75400 RNU1-148P-201ENST00000384472 162 ntBASIC3.13□□□□□ -1.91
PRPF40AO75400 RNA5SP210-201ENST00000391034 120 ntBASIC3.13□□□□□ -1.91
PRPF40AO75400 SNORA79-201ENST00000408376 140 ntBASIC3.13□□□□□ -1.91
PRPF40AO75400 AC063976.3-201ENST00000426849 329 ntBASIC3.13□□□□□ -1.91
PRPF40AO75400 AL139132.1-201ENST00000431587 344 ntBASIC3.13□□□□□ -1.91
PRPF40AO75400 RPL23AP91-201ENST00000569211 455 ntBASIC3.13□□□□□ -1.91
PRPF40AO75400 AL033523.1-201ENST00000605153 153 ntBASIC3.13□□□□□ -1.91
PRPF40AO75400 MIR6079-201ENST00000635807 62 ntBASIC3.13□□□□□ -1.91
PRPF40AO75400 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PRPF40AO75400 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PRPF40AO75400 AC018630.2-201ENST00000534866 2403 ntBASIC3.12□□□□□ -1.91
PRPF40AO75400 SNORA33-201ENST00000363664 130 ntBASIC3.12□□□□□ -1.91
PRPF40AO75400 Y_RNA.267-201ENST00000364679 109 ntBASIC3.12□□□□□ -1.91
PRPF40AO75400 MIR562-201ENST00000384894 95 ntBASIC3.12□□□□□ -1.91
PRPF40AO75400 AL117342.1-201ENST00000404861 406 ntBASIC3.12□□□□□ -1.91
PRPF40AO75400 SNORA11.4-201ENST00000408823 129 ntBASIC3.12□□□□□ -1.91
PRPF40AO75400 Y_RNA.622-201ENST00000411091 108 ntBASIC3.12□□□□□ -1.91
PRPF40AO75400 RNU6-1291P-201ENST00000516591 104 ntBASIC3.12□□□□□ -1.91
PRPF40AO75400 AC024995.1-201ENST00000523014 93 ntBASIC3.12□□□□□ -1.91
PRPF40AO75400 MIR3169-201ENST00000578032 83 ntBASIC3.12□□□□□ -1.91
PRPF40AO75400 AL049861.1-201ENST00000603130 150 ntBASIC3.12□□□□□ -1.91
PRPF40AO75400 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRPF40AO75400 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.11□□□□□ -1.91
PRPF40AO75400 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
PRPF40AO75400 RNU7-94P-201ENST00000459576 63 ntBASIC3.11□□□□□ -1.91
PRPF40AO75400 RNU6-561P-201ENST00000516222 102 ntBASIC3.11□□□□□ -1.91
PRPF40AO75400 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.11□□□□□ -1.91
PRPF40AO75400 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PRPF40AO75400 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PRPF40AO75400 RNU1-58P-201ENST00000362413 163 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 VTRNA1-1-201ENST00000363120 99 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 RNU6-151P-201ENST00000364158 107 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 Y_RNA.337-201ENST00000365312 102 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 RNU6-1080P-201ENST00000383982 107 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 MIR613-201ENST00000385248 95 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 TMSB4XP3-201ENST00000445144 114 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 RNU6-406P-201ENST00000516470 107 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 RNU6-341P-201ENST00000516973 96 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 MIR4658-201ENST00000584344 65 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 AC091178.2-201ENST00000584401 117 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 AL021707.8-201ENST00000609428 183 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 Y_RNA.778-201ENST00000620203 90 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 ZNF271P-202ENST00000465539 1970 ntBASIC3.1□□□□□ -1.91
PRPF40AO75400 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PRPF40AO75400 SNORA5B-201ENST00000363786 132 ntBASIC3.09□□□□□ -1.91
PRPF40AO75400 SNORD45.3-201ENST00000363836 72 ntBASIC3.09□□□□□ -1.91
PRPF40AO75400 Y_RNA.343-201ENST00000365354 112 ntBASIC3.09□□□□□ -1.91
PRPF40AO75400 DEFA7P-201ENST00000382676 285 ntBASIC3.09□□□□□ -1.91
PRPF40AO75400 Y_RNA.400-201ENST00000383963 111 ntBASIC3.09□□□□□ -1.91
PRPF40AO75400 AL135938.1-201ENST00000443141 297 ntBASIC3.09□□□□□ -1.91
PRPF40AO75400 SNORA59A-201ENST00000459326 152 ntBASIC3.09□□□□□ -1.91
PRPF40AO75400 MIR3910-1-201ENST00000580936 111 ntBASIC3.09□□□□□ -1.91
PRPF40AO75400 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.09□□□□□ -1.91
PRPF40AO75400 U6.108-201ENST00000637764 58 ntBASIC3.09□□□□□ -1.91
PRPF40AO75400 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PRPF40AO75400 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRPF40AO75400 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.08□□□□□ -1.92
PRPF40AO75400 RNU6-1209P-201ENST00000363655 107 ntBASIC3.08□□□□□ -1.92
PRPF40AO75400 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.08□□□□□ -1.92
PRPF40AO75400 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF40AO75400 RNA5SP367-201ENST00000516557 118 ntBASIC3.08□□□□□ -1.92
PRPF40AO75400 RNA5SP137-201ENST00000516833 135 ntBASIC3.08□□□□□ -1.92
PRPF40AO75400 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF40AO75400 MIR4635-201ENST00000583759 79 ntBASIC3.08□□□□□ -1.92
PRPF40AO75400 AC005786.1-201ENST00000588553 154 ntBASIC3.08□□□□□ -1.92
PRPF40AO75400 DNAJC19P2-201ENST00000593340 302 ntBASIC3.08□□□□□ -1.92
PRPF40AO75400 uc_338.4-201ENST00000616635 176 ntBASIC3.08□□□□□ -1.92
PRPF40AO75400 AC010297.1-201ENST00000623948 149 ntBASIC3.08□□□□□ -1.92
PRPF40AO75400 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRPF40AO75400 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PRPF40AO75400 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.07□□□□□ -1.92
PRPF40AO75400 Y_RNA.796-201ENST00000364268 102 ntBASIC3.07□□□□□ -1.92
PRPF40AO75400 Y_RNA.799-201ENST00000364992 102 ntBASIC3.07□□□□□ -1.92
PRPF40AO75400 Y_RNA.432-201ENST00000384087 111 ntBASIC3.07□□□□□ -1.92
PRPF40AO75400 Y_RNA.488-201ENST00000384403 102 ntBASIC3.07□□□□□ -1.92
PRPF40AO75400 Y_RNA.521-201ENST00000384560 114 ntBASIC3.07□□□□□ -1.92
PRPF40AO75400 RNA5SP181-201ENST00000410246 98 ntBASIC3.07□□□□□ -1.92
PRPF40AO75400 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.07□□□□□ -1.92
PRPF40AO75400 BX510359.4-201ENST00000423750 193 ntBASIC3.07□□□□□ -1.92
PRPF40AO75400 RPS26P45-201ENST00000471748 340 ntBASIC3.07□□□□□ -1.92
PRPF40AO75400 AL163195.1-201ENST00000496941 348 ntBASIC3.07□□□□□ -1.92
PRPF40AO75400 SNORD116-25-201ENST00000516517 92 ntBASIC3.07□□□□□ -1.92
PRPF40AO75400 RNU7-121P-201ENST00000516604 62 ntBASIC3.07□□□□□ -1.92
PRPF40AO75400 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.07□□□□□ -1.92
PRPF40AO75400 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.06□□□□□ -1.92
PRPF40AO75400 RNU4-43P-201ENST00000410628 137 ntBASIC3.06□□□□□ -1.92
PRPF40AO75400 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms