Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MIR4299-201ENST00000577899 72 ntBASIC2.29□□□□□ -2.04
PRPF3O43395 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
PRPF3O43395 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PRPF3O43395 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PRPF3O43395 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PRPF3O43395 RNU6-661P-201ENST00000362409 107 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 Y_RNA.16-201ENST00000362421 102 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 RNA5SP276-201ENST00000362580 94 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 Y_RNA.136-201ENST00000363444 102 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 SNORA33-201ENST00000363664 130 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 Y_RNA.396-201ENST00000383949 103 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 Y_RNA.418-201ENST00000384029 102 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 RNU6-472P-201ENST00000384299 107 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 Y_RNA.483-201ENST00000384380 101 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 Y_RNA.556-201ENST00000384677 113 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 RNU6-376P-201ENST00000384731 106 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 AC010409.1-201ENST00000487382 476 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 RNU6-1338P-201ENST00000516328 91 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 RNU7-128P-201ENST00000517247 62 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 AC015712.3-201ENST00000559380 164 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.28□□□□□ -2.04
PRPF3O43395 7SK.10-201ENST00000621414 298 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 U6.108-201ENST00000637764 58 ntBASIC2.28□□□□□ -2.04
PRPF3O43395 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PRPF3O43395 RNU4-52P-201ENST00000384209 138 ntBASIC2.27□□□□□ -2.05
PRPF3O43395 Y_RNA.456-201ENST00000384232 111 ntBASIC2.27□□□□□ -2.05
PRPF3O43395 RNU6-463P-201ENST00000384340 107 ntBASIC2.27□□□□□ -2.05
PRPF3O43395 RNU6-296P-201ENST00000384608 107 ntBASIC2.27□□□□□ -2.05
PRPF3O43395 RNA5SP338-201ENST00000410495 85 ntBASIC2.27□□□□□ -2.05
PRPF3O43395 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.27□□□□□ -2.05
PRPF3O43395 MIR514B-201ENST00000516774 80 ntBASIC2.27□□□□□ -2.05
PRPF3O43395 RNU2-31P-201ENST00000516954 155 ntBASIC2.27□□□□□ -2.05
PRPF3O43395 DEFB108E-201ENST00000524692 240 ntBASIC2.27□□□□□ -2.05
PRPF3O43395 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.27□□□□□ -2.05
PRPF3O43395 AL096840.1-201ENST00000603287 93 ntBASIC2.27□□□□□ -2.05
PRPF3O43395 SNRPGP19-201ENST00000603826 189 ntBASIC2.27□□□□□ -2.05
PRPF3O43395 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
PRPF3O43395 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PRPF3O43395 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PRPF3O43395 RNU4-80P-201ENST00000363200 141 ntBASIC2.26□□□□□ -2.05
PRPF3O43395 RNU6-117P-201ENST00000365415 107 ntBASIC2.26□□□□□ -2.05
PRPF3O43395 RNU6-326P-201ENST00000365480 107 ntBASIC2.26□□□□□ -2.05
PRPF3O43395 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.26□□□□□ -2.05
PRPF3O43395 RNU7-28P-201ENST00000516759 62 ntBASIC2.26□□□□□ -2.05
PRPF3O43395 RNU6-341P-201ENST00000516973 96 ntBASIC2.26□□□□□ -2.05
PRPF3O43395 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.26□□□□□ -2.05
PRPF3O43395 MIR4503-201ENST00000582187 83 ntBASIC2.26□□□□□ -2.05
PRPF3O43395 MIR4448-201ENST00000584360 86 ntBASIC2.26□□□□□ -2.05
PRPF3O43395 AP001282.2-201ENST00000616149 309 ntBASIC2.26□□□□□ -2.05
PRPF3O43395 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PRPF3O43395 SNORA25.1-201ENST00000362326 128 ntBASIC2.25□□□□□ -2.05
PRPF3O43395 Y_RNA.368-201ENST00000365547 113 ntBASIC2.25□□□□□ -2.05
PRPF3O43395 AL591806.2-201ENST00000433122 173 ntBASIC2.25□□□□□ -2.05
PRPF3O43395 MTCO1P5-201ENST00000433573 344 ntBASIC2.25□□□□□ -2.05
PRPF3O43395 RNU6-1337P-201ENST00000516525 95 ntBASIC2.25□□□□□ -2.05
PRPF3O43395 SCARNA24.2-201ENST00000516968 130 ntBASIC2.25□□□□□ -2.05
PRPF3O43395 AC073413.2-201ENST00000604332 360 ntBASIC2.25□□□□□ -2.05
PRPF3O43395 SNORA28-201ENST00000606769 126 ntBASIC2.25□□□□□ -2.05
PRPF3O43395 U4.1-201ENST00000620349 87 ntBASIC2.25□□□□□ -2.05
PRPF3O43395 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.25□□□□□ -2.05
PRPF3O43395 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.25□□□□□ -2.05
PRPF3O43395 MIR6079-201ENST00000635807 62 ntBASIC2.25□□□□□ -2.05
PRPF3O43395 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
PRPF3O43395 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.24□□□□□ -2.05
PRPF3O43395 AL356292.1-201ENST00000283110 373 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 AL391987.6-201ENST00000305671 199 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PRPF3O43395 Y_RNA.237-201ENST00000364439 102 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 Y_RNA.288-201ENST00000364854 92 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 RNU6-514P-201ENST00000384208 107 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 RNU6-574P-201ENST00000384265 107 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PRPF3O43395 RNU6-855P-201ENST00000410395 104 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 RN7SKP200-201ENST00000410564 320 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 COX6CP10-201ENST00000416832 224 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 AL162725.1-201ENST00000435405 301 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.24□□□□□ -2.05
PRPF3O43395 SERF1AP1-201ENST00000514575 187 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 RNU7-116P-201ENST00000516940 62 ntBASIC2.24□□□□□ -2.05
PRPF3O43395 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.24□□□□□ -2.05
PRPF3O43395 SNORD114-1-201ENST00000362705 72 ntBASIC2.23□□□□□ -2.05
PRPF3O43395 RNU4-13P-201ENST00000364019 141 ntBASIC2.23□□□□□ -2.05
PRPF3O43395 RNA5SP138-201ENST00000365098 114 ntBASIC2.23□□□□□ -2.05
PRPF3O43395 Y_RNA.452-201ENST00000384202 108 ntBASIC2.23□□□□□ -2.05
PRPF3O43395 RNU2-40P-201ENST00000410833 196 ntBASIC2.23□□□□□ -2.05
PRPF3O43395 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.23□□□□□ -2.05
PRPF3O43395 RNU6-63P-201ENST00000516690 95 ntBASIC2.23□□□□□ -2.05
PRPF3O43395 SNORA31.17-201ENST00000516953 127 ntBASIC2.23□□□□□ -2.05
PRPF3O43395 AP002004.2-201ENST00000531656 154 ntBASIC2.23□□□□□ -2.05
PRPF3O43395 MIR3149-201ENST00000584629 83 ntBASIC2.23□□□□□ -2.05
PRPF3O43395 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PRPF3O43395 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRPF3O43395 MIR335-201ENST00000362173 94 ntBASIC2.22□□□□□ -2.05
PRPF3O43395 RNU6-702P-201ENST00000364982 107 ntBASIC2.22□□□□□ -2.05
PRPF3O43395 Y_RNA.341-201ENST00000365341 102 ntBASIC2.22□□□□□ -2.05
PRPF3O43395 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.22□□□□□ -2.05
PRPF3O43395 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PRPF3O43395 AC245047.3-201ENST00000429428 127 ntBASIC2.22□□□□□ -2.05
PRPF3O43395 snoU13.27-201ENST00000459278 104 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms