Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 MIR300-201ENST00000401138 83 ntBASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 RNU4-69P-201ENST00000410677 143 ntBASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 RNU6-1006P-201ENST00000516998 103 ntBASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 MIR4712-201ENST00000583750 82 ntBASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 HSPE1P19-201ENST00000603327 295 ntBASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 AC064859.1-201ENST00000624741 174 ntBASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 AC000403.1-201ENST00000613696 3585 ntBASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.92□□□□□ -1.78
CTC1Q2NKJ3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 RNA5SP295-201ENST00000362655 121 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 RNU4-16P-201ENST00000364737 141 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 RNU6-1189P-201ENST00000383958 107 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 RNA5SP38-201ENST00000410750 119 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 AL353813.1-201ENST00000440700 253 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 RPS29P21-201ENST00000496272 170 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 AC114801.3-201ENST00000510231 177 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 RNU6-1096P-201ENST00000517089 102 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 MIR4438-201ENST00000585271 93 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 ELOCP29-201ENST00000588193 334 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 AL137849.1-201ENST00000604767 169 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 AC145423.2-201ENST00000610631 239 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 AC013412.1-201ENST00000610687 192 ntBASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.91□□□□□ -1.78
CTC1Q2NKJ3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.9□□□□□ -1.78
CTC1Q2NKJ3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.9□□□□□ -1.78
CTC1Q2NKJ3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CTC1Q2NKJ3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CTC1Q2NKJ3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CTC1Q2NKJ3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.9□□□□□ -1.78
CTC1Q2NKJ3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.9□□□□□ -1.78
CTC1Q2NKJ3 AC093831.2-201ENST00000624393 3427 ntBASIC3.9□□□□□ -1.78
CTC1Q2NKJ3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 SNORA38.1-201ENST00000364172 131 ntBASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 SNORD32B-201ENST00000364460 84 ntBASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 RNU6-590P-201ENST00000365039 107 ntBASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 MIR1289-1-201ENST00000408836 144 ntBASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 AC016909.1-201ENST00000415916 166 ntBASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 HMGN1P7-201ENST00000491722 313 ntBASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 RNU2-27P-201ENST00000516185 142 ntBASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTC1Q2NKJ3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 MFSD8-236ENST00000641509 4050 ntBASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 Y_RNA.410-201ENST00000383992 113 ntBASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 RNU6-616P-201ENST00000384353 107 ntBASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 SNORA7.5-201ENST00000410672 110 ntBASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 AC112771.1-201ENST00000463581 102 ntBASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 AL035425.3-201ENST00000564206 4996 ntBASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CTC1Q2NKJ3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 Y_RNA.253-201ENST00000364562 112 ntBASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 SNORA14A-201ENST00000364773 135 ntBASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 RNU1-57P-201ENST00000384491 166 ntBASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 RNU6-679P-201ENST00000391003 106 ntBASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 AC010401.1-201ENST00000463867 348 ntBASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 RAC1P2-201ENST00000511164 579 ntBASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 MIR7851-201ENST00000610611 160 ntBASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CTC1Q2NKJ3 AC006504.1-201ENST00000562493 3666 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 RNU6-661P-201ENST00000362409 107 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 SNORD115-19-201ENST00000363098 82 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 SNORD115-18-201ENST00000363293 82 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 SNORD116-10-201ENST00000363791 102 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 SNORD115-17-201ENST00000364612 82 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 MIR548O-201ENST00000408583 114 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 SNORA31.21-201ENST00000517180 77 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 MIR3683-201ENST00000580847 82 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 uc_338.14-201ENST00000613162 166 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 AC095038.3-201ENST00000634439 195 ntBASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.87□□□□□ -1.79
CTC1Q2NKJ3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.86□□□□□ -1.79
CTC1Q2NKJ3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTC1Q2NKJ3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms