Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SMPD1P17405 Y_RNA.4-201ENST00000362333 112 ntBASIC3.82□□□□□ -1.8
SMPD1P17405 RNY1P4-201ENST00000384595 115 ntBASIC3.82□□□□□ -1.8
SMPD1P17405 RNU2-58P-201ENST00000516403 183 ntBASIC3.82□□□□□ -1.8
SMPD1P17405 RNA5SP309-201ENST00000516670 106 ntBASIC3.82□□□□□ -1.8
SMPD1P17405 MIR5004-201ENST00000579078 107 ntBASIC3.82□□□□□ -1.8
SMPD1P17405 MIR4325-201ENST00000583049 90 ntBASIC3.82□□□□□ -1.8
SMPD1P17405 AC073413.2-201ENST00000604332 360 ntBASIC3.82□□□□□ -1.8
SMPD1P17405 uc_338.32-201ENST00000615087 172 ntBASIC3.82□□□□□ -1.8
SMPD1P17405 AC090517.3-201ENST00000625170 141 ntBASIC3.82□□□□□ -1.8
SMPD1P17405 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
SMPD1P17405 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMPD1P17405 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.81□□□□□ -1.8
SMPD1P17405 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.81□□□□□ -1.8
SMPD1P17405 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMPD1P17405 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SMPD1P17405 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMPD1P17405 AC017071.1-201ENST00000564407 2204 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.81□□□□□ -1.8
SMPD1P17405 Y_RNA.37-201ENST00000362606 108 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 SNORD115-28-201ENST00000363931 81 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 RNU1-96P-201ENST00000364163 162 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 Y_RNA.440-201ENST00000384120 114 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 MIR802-201ENST00000390235 94 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.81□□□□□ -1.8
SMPD1P17405 AC233266.1-201ENST00000454518 96 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 RNA5SP310-201ENST00000459084 116 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 RNU7-80P-201ENST00000459562 61 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 SNRPGP3-201ENST00000469405 227 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.81□□□□□ -1.8
SMPD1P17405 Y_RNA.773-201ENST00000607168 90 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 AC242852.1-201ENST00000612151 96 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 uc_338.14-201ENST00000613162 166 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 AC244015.1-201ENST00000622301 99 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.81□□□□□ -1.8
SMPD1P17405 USP8P1-201ENST00000494673 3183 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 AP003122.5-201ENST00000527668 3766 ntBASIC3.81□□□□□ -1.8
SMPD1P17405 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMPD1P17405 SNORA14A-201ENST00000364773 135 ntBASIC3.8□□□□□ -1.8
SMPD1P17405 Y_RNA.377-201ENST00000365644 108 ntBASIC3.8□□□□□ -1.8
SMPD1P17405 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMPD1P17405 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SMPD1P17405 HMGN2P8-201ENST00000391458 268 ntBASIC3.8□□□□□ -1.8
SMPD1P17405 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.8□□□□□ -1.8
SMPD1P17405 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.8□□□□□ -1.8
SMPD1P17405 RPS29P31-201ENST00000446147 164 ntBASIC3.8□□□□□ -1.8
SMPD1P17405 RNU6-1006P-201ENST00000516998 103 ntBASIC3.8□□□□□ -1.8
SMPD1P17405 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.8□□□□□ -1.8
SMPD1P17405 AC026333.2-201ENST00000542164 106 ntBASIC3.8□□□□□ -1.8
SMPD1P17405 AL110115.1-201ENST00000614396 364 ntBASIC3.8□□□□□ -1.8
SMPD1P17405 AC064859.1-201ENST00000624741 174 ntBASIC3.8□□□□□ -1.8
SMPD1P17405 MIR548BB-201ENST00000626714 66 ntBASIC3.8□□□□□ -1.8
SMPD1P17405 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.8□□□□□ -1.8
SMPD1P17405 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.8□□□□□ -1.8
SMPD1P17405 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMPD1P17405 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMPD1P17405 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMPD1P17405 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMPD1P17405 MIR126-201ENST00000362291 85 ntBASIC3.79□□□□□ -1.8
SMPD1P17405 Y_RNA.94-201ENST00000363068 106 ntBASIC3.79□□□□□ -1.8
SMPD1P17405 SNORD116-10-201ENST00000363791 102 ntBASIC3.79□□□□□ -1.8
SMPD1P17405 Y_RNA.351-201ENST00000365436 96 ntBASIC3.79□□□□□ -1.8
SMPD1P17405 RNU6-438P-201ENST00000365561 103 ntBASIC3.79□□□□□ -1.8
SMPD1P17405 AP002884.2-201ENST00000471647 395 ntBASIC3.79□□□□□ -1.8
SMPD1P17405 RPS23P4-201ENST00000487908 423 ntBASIC3.79□□□□□ -1.8
SMPD1P17405 SNORD36C-201ENST00000516733 66 ntBASIC3.79□□□□□ -1.8
SMPD1P17405 AL360157.1-201ENST00000565962 87 ntBASIC3.79□□□□□ -1.8
SMPD1P17405 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMPD1P17405 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SMPD1P17405 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.79□□□□□ -1.8
SMPD1P17405 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMPD1P17405 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
SMPD1P17405 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMPD1P17405 RNU6-509P-201ENST00000363519 107 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 RNA5SP189-201ENST00000364920 115 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 Y_RNA.316-201ENST00000365118 111 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 Y_RNA.565-201ENST00000384719 101 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SMPD1P17405 RNU11-5P-201ENST00000391216 129 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 AC097463.2-201ENST00000421074 142 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 AC006989.1-201ENST00000427212 131 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 RNU7-23P-201ENST00000459465 62 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 S100A11P2-201ENST00000467589 312 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 Y_RNA.659-201ENST00000515994 113 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 AC090115.4-201ENST00000609970 188 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 AC006441.5-201ENST00000612680 209 ntBASIC3.78□□□□□ -1.8
SMPD1P17405 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMPD1P17405 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.78□□□□□ -1.8
SMPD1P17405 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMPD1P17405 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMPD1P17405 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMPD1P17405 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
SMPD1P17405 RNU6-283P-201ENST00000364788 107 ntBASIC3.77□□□□□ -1.81
SMPD1P17405 Y_RNA.467-201ENST00000384297 102 ntBASIC3.77□□□□□ -1.81
SMPD1P17405 MIR1183-201ENST00000408856 89 ntBASIC3.77□□□□□ -1.81
SMPD1P17405 RNU2-40P-201ENST00000410833 196 ntBASIC3.77□□□□□ -1.81
SMPD1P17405 FTH1P12-201ENST00000432137 551 ntBASIC3.77□□□□□ -1.81
SMPD1P17405 AL353813.1-201ENST00000440700 253 ntBASIC3.77□□□□□ -1.81
SMPD1P17405 AC006445.1-201ENST00000491925 405 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms