Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC004486.1-201ENST00000546846 233 ntBASIC3.48□□□□□ -1.85
HRH3Q9Y5N1 SNORA62.6-201ENST00000606322 83 ntBASIC3.48□□□□□ -1.85
HRH3Q9Y5N1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
HRH3Q9Y5N1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 AC008264.2-201ENST00000610193 3731 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 SNORD14E-201ENST00000364009 85 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 RNU6-442P-201ENST00000383968 104 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 U8.17-201ENST00000391292 132 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 SNORA11.1-201ENST00000408133 129 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 U3.44-201ENST00000458938 192 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 RNY4P20-201ENST00000516678 93 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 AP002004.2-201ENST00000531656 154 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 MIR5009-201ENST00000578736 100 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 MIR3922-201ENST00000585192 84 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 RNVU1-4-201ENST00000612985 164 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 Y_RNA.818-201ENST00000618813 71 ntBASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HRH3Q9Y5N1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
HRH3Q9Y5N1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 AL161912.2-201ENST00000565707 3007 ntBASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 RNU6-1084P-201ENST00000362498 107 ntBASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 MIR548O-201ENST00000408583 114 ntBASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 RNU6-1041P-201ENST00000516254 102 ntBASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 SNORA48.11-201ENST00000517015 89 ntBASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 AC068339.1-201ENST00000526965 141 ntBASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 MIR4778-201ENST00000577635 80 ntBASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 MIR3944-201ENST00000581277 108 ntBASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 AC021443.1-201ENST00000604478 211 ntBASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HRH3Q9Y5N1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 IPO8P1-201ENST00000455509 3109 ntBASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 ZNF720P1-201ENST00000562403 1939 ntBASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 MIR184-201ENST00000384962 84 ntBASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 MIR95-201ENST00000385072 81 ntBASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 RNA5SP467-201ENST00000391274 118 ntBASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 AL035423.1-201ENST00000420331 213 ntBASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 PRSS3P4-201ENST00000453323 162 ntBASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 TRBV12-2-201ENST00000489763 344 ntBASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 AC091544.4-201ENST00000555268 342 ntBASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 AL356280.1-201ENST00000603614 379 ntBASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HRH3Q9Y5N1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 RNU1-133P-201ENST00000364867 167 ntBASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 RNU6-49P-201ENST00000384256 107 ntBASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 MIR515-2-201ENST00000384883 83 ntBASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 MIR515-1-201ENST00000384884 83 ntBASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 MIR7-3-201ENST00000384898 110 ntBASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 MIR522-201ENST00000385071 87 ntBASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 MIR561-201ENST00000385216 97 ntBASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 AL353689.1-201ENST00000438895 199 ntBASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 AL355297.2-201ENST00000604792 129 ntBASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HRH3Q9Y5N1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 Y_RNA.78-201ENST00000362970 110 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 SNORD68-201ENST00000363214 84 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 RNU1-23P-201ENST00000363361 144 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 SNORD115-28-201ENST00000363931 81 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 RNA5SP51-201ENST00000364750 119 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 MIR591-201ENST00000385290 95 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 RNU1-101P-201ENST00000391171 127 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 RNU6-1328P-201ENST00000410938 106 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 AC099677.2-201ENST00000436385 175 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 AC104619.4-201ENST00000510773 249 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 RNU7-128P-201ENST00000517247 62 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 AC008011.1-201ENST00000545989 227 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 AL161756.2-201ENST00000604597 246 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 AL137849.1-201ENST00000604767 169 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 MIR8058-201ENST00000615737 89 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 MIR338-201ENST00000636369 67 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms