Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RNU6-513P-201ENST00000516104 104 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 AC026403.1-201ENST00000518938 295 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 MTND6P33-201ENST00000571794 183 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR5006-201ENST00000583027 110 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 AC008739.3-201ENST00000603262 127 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU1-30P-201ENST00000606575 163 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 TCL6_2.1-201ENST00000615162 119 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 uc_338.9-201ENST00000617424 182 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 U73479.1-201ENST00000618062 168 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 U6.105-201ENST00000637379 88 ntBASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-3Q9BYR4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
KRTAP4-3Q9BYR4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
KRTAP4-3Q9BYR4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.28□□□□□ -2.21
KRTAP4-3Q9BYR4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 MIR340-201ENST00000362125 95 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 SNORD9-201ENST00000362566 104 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 RNA5SP119-201ENST00000362715 117 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 RNU6-1204P-201ENST00000363948 107 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 SNORA72.6-201ENST00000384520 129 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 MIR183-201ENST00000384958 110 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 MIR1262-201ENST00000408276 93 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 SNORA3C-201ENST00000408792 125 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 CYCSP48-201ENST00000417124 323 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 HMGN2P20-201ENST00000437531 273 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 PRSS3P4-201ENST00000453323 162 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 BX510359.1-201ENST00000456973 237 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 snoU109.4-201ENST00000458953 143 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 SNORD65B-201ENST00000459126 73 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 RNU7-34P-201ENST00000459394 64 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 SEM1P1-201ENST00000506694 209 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 AC010598.1-201ENST00000510378 103 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 RNU6-752P-201ENST00000516376 102 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 RNU6-531P-201ENST00000516694 104 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 SNORA40.16-201ENST00000517238 121 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 AP004371.1-201ENST00000525240 214 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 CYCSP30-201ENST00000546447 172 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 AC233702.9-201ENST00000581528 203 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 SNORD92-201ENST00000585078 85 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 AC087685.1-201ENST00000587507 141 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 AC115085.1-201ENST00000588924 229 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 SNORA51-201ENST00000606420 132 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 MIR6075-201ENST00000620782 95 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 MIR7702-201ENST00000621931 59 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 AC018692.3-201ENST00000623929 123 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 MIR6841-201ENST00000637129 72 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 NOL8P1-201ENST00000508336 3529 ntBASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC1.27□□□□□ -2.21
KRTAP4-3Q9BYR4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-3Q9BYR4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
KRTAP4-3Q9BYR4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-3Q9BYR4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-3Q9BYR4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-3Q9BYR4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP4-3Q9BYR4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms