Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MIR4778-201ENST00000577635 80 ntBASIC3.88□□□□□ -1.79
HLA-CQ95604 AC104984.5-201ENST00000586878 94 ntBASIC3.88□□□□□ -1.79
HLA-CQ95604 AC022217.4-201ENST00000604389 163 ntBASIC3.88□□□□□ -1.79
HLA-CQ95604 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-CQ95604 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.88□□□□□ -1.79
HLA-CQ95604 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-CQ95604 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-CQ95604 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-CQ95604 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
HLA-CQ95604 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-CQ95604 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-CQ95604 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
HLA-CQ95604 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-CQ95604 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-CQ95604 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-CQ95604 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-CQ95604 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
HLA-CQ95604 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-CQ95604 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-CQ95604 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-CQ95604 SNORD115-28-201ENST00000363931 81 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 U8.5-201ENST00000364528 136 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 MIR1912-201ENST00000410389 80 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 HMGN2P7-201ENST00000456186 273 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 AC010401.1-201ENST00000463867 348 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 SNORD59.2-201ENST00000516873 68 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 MIR3683-201ENST00000580847 82 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 MALAT1.1-201ENST00000618249 95 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 MIR338-201ENST00000636369 67 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HLA-CQ95604 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 AL596211.1-201ENST00000569873 2277 ntBASIC3.87□□□□□ -1.79
HLA-CQ95604 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-CQ95604 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-CQ95604 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-CQ95604 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-CQ95604 SNORD14E-201ENST00000364009 85 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 Y_RNA.267-201ENST00000364679 109 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 S100A11P2-201ENST00000467589 312 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 AL049830.1-201ENST00000468034 425 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 CKS1BP2-201ENST00000497342 240 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 SEM1P1-201ENST00000506694 209 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 PPBPP1-201ENST00000510807 373 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 RN7SKP209-201ENST00000516888 304 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 SNORA62.6-201ENST00000606322 83 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 AL162274.2-201ENST00000614406 332 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 AL591424.2-201ENST00000617023 128 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 AL162726.3-218ENST00000636401 95 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-CQ95604 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-CQ95604 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HLA-CQ95604 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HLA-CQ95604 OTUD4P1-201ENST00000237841 3067 ntBASIC3.86□□□□□ -1.79
HLA-CQ95604 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HLA-CQ95604 MAPK10-322ENST00000641485 4530 ntBASIC3.85□□□□□ -1.79
HLA-CQ95604 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-CQ95604 Y_RNA.37-201ENST00000362606 108 ntBASIC3.85□□□□□ -1.79
HLA-CQ95604 RNA5SP374-201ENST00000362939 125 ntBASIC3.85□□□□□ -1.79
HLA-CQ95604 RNU1-133P-201ENST00000364867 167 ntBASIC3.85□□□□□ -1.79
HLA-CQ95604 Y_RNA.454-201ENST00000384224 113 ntBASIC3.85□□□□□ -1.79
HLA-CQ95604 U8.17-201ENST00000391292 132 ntBASIC3.85□□□□□ -1.79
HLA-CQ95604 AC087499.4-201ENST00000448505 178 ntBASIC3.85□□□□□ -1.79
HLA-CQ95604 RNU7-80P-201ENST00000459562 61 ntBASIC3.85□□□□□ -1.79
HLA-CQ95604 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-CQ95604 RNU6-991P-201ENST00000516168 107 ntBASIC3.85□□□□□ -1.79
HLA-CQ95604 RNU6-109P-201ENST00000516364 107 ntBASIC3.85□□□□□ -1.79
HLA-CQ95604 RNU6-184P-201ENST00000516514 107 ntBASIC3.85□□□□□ -1.79
HLA-CQ95604 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-CQ95604 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-CQ95604 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-CQ95604 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HLA-CQ95604 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-CQ95604 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
HLA-CQ95604 RNU4-35P-201ENST00000362588 141 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 Y_RNA.107-201ENST00000363190 121 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 RNU6-743P-201ENST00000364151 106 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 RNA5SP173-201ENST00000364857 136 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 Y_RNA.336-201ENST00000365307 109 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 Y_RNA.344-201ENST00000365381 112 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 RNU6-1152P-201ENST00000384576 107 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 RNU1-131P-201ENST00000458943 161 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 RNU7-164P-201ENST00000459221 62 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 RN7SL636P-201ENST00000497504 294 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 SUMO2P16-201ENST00000519475 264 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 AC141557.1-201ENST00000540982 400 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 U6.108-201ENST00000637764 58 ntBASIC3.84□□□□□ -1.79
HLA-CQ95604 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-CQ95604 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
HLA-CQ95604 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
HLA-CQ95604 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.8
HLA-CQ95604 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
HLA-CQ95604 SNORA80A-201ENST00000363922 136 ntBASIC3.83□□□□□ -1.8
HLA-CQ95604 RNU4-36P-201ENST00000364294 144 ntBASIC3.83□□□□□ -1.8
HLA-CQ95604 snoU2-30.1-201ENST00000365012 70 ntBASIC3.83□□□□□ -1.8
HLA-CQ95604 RNU2-48P-201ENST00000410694 191 ntBASIC3.83□□□□□ -1.8
HLA-CQ95604 RNU2-63P-201ENST00000410792 194 ntBASIC3.83□□□□□ -1.8
HLA-CQ95604 RNU6-1328P-201ENST00000410938 106 ntBASIC3.83□□□□□ -1.8
HLA-CQ95604 RN7SL504P-201ENST00000494496 287 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms