Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDC27P30260 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDC27P30260 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.48□□□□□ -1.85
CDC27P30260 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDC27P30260 Y_RNA.91-201ENST00000363042 107 ntBASIC3.48□□□□□ -1.85
CDC27P30260 SNORA72-201ENST00000384339 132 ntBASIC3.48□□□□□ -1.85
CDC27P30260 RNU6-1274P-201ENST00000384557 107 ntBASIC3.48□□□□□ -1.85
CDC27P30260 MIR483-201ENST00000385070 76 ntBASIC3.48□□□□□ -1.85
CDC27P30260 RNU2-70P-201ENST00000410718 179 ntBASIC3.48□□□□□ -1.85
CDC27P30260 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.48□□□□□ -1.85
CDC27P30260 SNORA74D-201ENST00000516404 141 ntBASIC3.48□□□□□ -1.85
CDC27P30260 RNA5SP153-201ENST00000516498 76 ntBASIC3.48□□□□□ -1.85
CDC27P30260 RNU2-60P-201ENST00000517290 128 ntBASIC3.48□□□□□ -1.85
CDC27P30260 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.48□□□□□ -1.85
CDC27P30260 uc_338.4-201ENST00000616635 176 ntBASIC3.48□□□□□ -1.85
CDC27P30260 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.48□□□□□ -1.85
CDC27P30260 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDC27P30260 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDC27P30260 SNORA71.1-201ENST00000364523 117 ntBASIC3.47□□□□□ -1.85
CDC27P30260 Y_RNA.634-201ENST00000364811 113 ntBASIC3.47□□□□□ -1.85
CDC27P30260 SNORD31B-201ENST00000364977 69 ntBASIC3.47□□□□□ -1.85
CDC27P30260 RPL39P40-201ENST00000445481 146 ntBASIC3.47□□□□□ -1.85
CDC27P30260 SNORD77.4-201ENST00000516158 81 ntBASIC3.47□□□□□ -1.85
CDC27P30260 RNU6-948P-201ENST00000516374 107 ntBASIC3.47□□□□□ -1.85
CDC27P30260 Y_RNA.690-201ENST00000516603 95 ntBASIC3.47□□□□□ -1.85
CDC27P30260 RPL23AP91-201ENST00000569211 455 ntBASIC3.47□□□□□ -1.85
CDC27P30260 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.47□□□□□ -1.85
CDC27P30260 AC006435.5-201ENST00000624486 112 ntBASIC3.47□□□□□ -1.85
CDC27P30260 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDC27P30260 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CDC27P30260 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.47□□□□□ -1.85
CDC27P30260 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CDC27P30260 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CDC27P30260 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.46□□□□□ -1.86
CDC27P30260 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.46□□□□□ -1.86
CDC27P30260 MIR422A-201ENST00000362286 90 ntBASIC3.46□□□□□ -1.86
CDC27P30260 Y_RNA.203-201ENST00000364106 102 ntBASIC3.46□□□□□ -1.86
CDC27P30260 SNORA68.1-201ENST00000364537 132 ntBASIC3.46□□□□□ -1.86
CDC27P30260 SNORD58C-201ENST00000365223 64 ntBASIC3.46□□□□□ -1.86
CDC27P30260 SNORD18B-201ENST00000365659 72 ntBASIC3.46□□□□□ -1.86
CDC27P30260 RNU6-418P-201ENST00000384035 107 ntBASIC3.46□□□□□ -1.86
CDC27P30260 MIR548A3-201ENST00000385297 97 ntBASIC3.46□□□□□ -1.86
CDC27P30260 AL603914.1-201ENST00000401964 204 ntBASIC3.46□□□□□ -1.86
CDC27P30260 Z96811.1-201ENST00000445880 108 ntBASIC3.46□□□□□ -1.86
CDC27P30260 RPS27P22-201ENST00000478056 241 ntBASIC3.46□□□□□ -1.86
CDC27P30260 RN7SL633P-201ENST00000488974 297 ntBASIC3.46□□□□□ -1.86
CDC27P30260 RNA5SP112-201ENST00000515937 99 ntBASIC3.46□□□□□ -1.86
CDC27P30260 RNA5SP341-201ENST00000516261 117 ntBASIC3.46□□□□□ -1.86
CDC27P30260 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.46□□□□□ -1.86
CDC27P30260 AC013412.1-201ENST00000610687 192 ntBASIC3.46□□□□□ -1.86
CDC27P30260 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDC27P30260 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.46□□□□□ -1.86
CDC27P30260 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDC27P30260 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDC27P30260 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDC27P30260 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDC27P30260 Y_RNA.35-201ENST00000362601 101 ntBASIC3.45□□□□□ -1.86
CDC27P30260 RNU6-508P-201ENST00000363231 103 ntBASIC3.45□□□□□ -1.86
CDC27P30260 RNU6-1164P-201ENST00000364428 107 ntBASIC3.45□□□□□ -1.86
CDC27P30260 SNORD116-21-201ENST00000384507 92 ntBASIC3.45□□□□□ -1.86
CDC27P30260 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.45□□□□□ -1.86
CDC27P30260 RNA5SP89-201ENST00000410300 108 ntBASIC3.45□□□□□ -1.86
CDC27P30260 RNA5SP274-201ENST00000410484 108 ntBASIC3.45□□□□□ -1.86
CDC27P30260 Y_RNA.617-201ENST00000410920 90 ntBASIC3.45□□□□□ -1.86
CDC27P30260 AC016909.1-201ENST00000415916 166 ntBASIC3.45□□□□□ -1.86
CDC27P30260 RPL30P4-201ENST00000429309 333 ntBASIC3.45□□□□□ -1.86
CDC27P30260 AC245102.2-201ENST00000448956 180 ntBASIC3.45□□□□□ -1.86
CDC27P30260 RN7SKP43-201ENST00000516173 320 ntBASIC3.45□□□□□ -1.86
CDC27P30260 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.45□□□□□ -1.86
CDC27P30260 MIR2681-201ENST00000581814 105 ntBASIC3.45□□□□□ -1.86
CDC27P30260 AC097639.2-201ENST00000603159 172 ntBASIC3.45□□□□□ -1.86
CDC27P30260 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDC27P30260 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.45□□□□□ -1.86
CDC27P30260 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CDC27P30260 RNU6-647P-201ENST00000364243 107 ntBASIC3.44□□□□□ -1.86
CDC27P30260 RNU6-309P-201ENST00000364573 106 ntBASIC3.44□□□□□ -1.86
CDC27P30260 Y_RNA.309-201ENST00000365046 111 ntBASIC3.44□□□□□ -1.86
CDC27P30260 RNU6-1235P-201ENST00000384559 107 ntBASIC3.44□□□□□ -1.86
CDC27P30260 AC008134.1-201ENST00000420943 193 ntBASIC3.44□□□□□ -1.86
CDC27P30260 AC023449.1-201ENST00000454464 154 ntBASIC3.44□□□□□ -1.86
CDC27P30260 RNU6-498P-201ENST00000459468 107 ntBASIC3.44□□□□□ -1.86
CDC27P30260 RPS26P45-201ENST00000471748 340 ntBASIC3.44□□□□□ -1.86
CDC27P30260 NDUFA5P6-201ENST00000542110 379 ntBASIC3.44□□□□□ -1.86
CDC27P30260 MIR7515-201ENST00000637837 67 ntBASIC3.44□□□□□ -1.86
CDC27P30260 RNU6-1240P-201ENST00000365155 104 ntBASIC3.43□□□□□ -1.86
CDC27P30260 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.43□□□□□ -1.86
CDC27P30260 RPS4XP11-201ENST00000446897 772 ntBASIC3.43□□□□□ -1.86
CDC27P30260 SNORD11-201ENST00000459124 84 ntBASIC3.43□□□□□ -1.86
CDC27P30260 RNU6-168P-201ENST00000516189 101 ntBASIC3.43□□□□□ -1.86
CDC27P30260 SCARNA17.1-201ENST00000516211 143 ntBASIC3.43□□□□□ -1.86
CDC27P30260 SCARNA17.2-201ENST00000516334 143 ntBASIC3.43□□□□□ -1.86
CDC27P30260 RNU6-781P-201ENST00000516377 101 ntBASIC3.43□□□□□ -1.86
CDC27P30260 MIR3117-201ENST00000584034 78 ntBASIC3.43□□□□□ -1.86
CDC27P30260 SCARNA17.4-201ENST00000614296 143 ntBASIC3.43□□□□□ -1.86
CDC27P30260 AL121890.5-201ENST00000620848 304 ntBASIC3.43□□□□□ -1.86
CDC27P30260 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.43□□□□□ -1.86
CDC27P30260 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CDC27P30260 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDC27P30260 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
CDC27P30260 RNU6-486P-201ENST00000363116 107 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms