Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 Y_RNA.634-201ENST00000364811 113 ntBASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 SNORD31B-201ENST00000364977 69 ntBASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 RNA5SP89-201ENST00000410300 108 ntBASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 NDUFB1P1-201ENST00000435191 180 ntBASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 TRBV12-2-201ENST00000489763 344 ntBASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 SEM1P1-201ENST00000506694 209 ntBASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 SNORA18.4-201ENST00000516440 124 ntBASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
ZC3H4Q9UPT8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-283P-201ENST00000364788 107 ntBASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 AC126124.2-201ENST00000413542 321 ntBASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 TRIAP1P1-201ENST00000427062 225 ntBASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 RPL39P40-201ENST00000445481 146 ntBASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 RN7SL863P-201ENST00000462370 296 ntBASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-168P-201ENST00000516189 101 ntBASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 RNA5SP153-201ENST00000516498 76 ntBASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-965P-201ENST00000516721 96 ntBASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 MIR4738-201ENST00000579134 87 ntBASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZC3H4Q9UPT8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-486P-201ENST00000363116 107 ntBASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-508P-201ENST00000363231 103 ntBASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 RPS29P21-201ENST00000496272 170 ntBASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 SNORD77.4-201ENST00000516158 81 ntBASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-309P-201ENST00000364573 106 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-1240P-201ENST00000365155 104 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-117P-201ENST00000365415 107 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-1235P-201ENST00000384559 107 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 MIR548A1-201ENST00000385041 97 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 SNORA26-201ENST00000391286 122 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 AL603914.1-201ENST00000401964 204 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 RPS4XP11-201ENST00000446897 772 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-498P-201ENST00000459468 107 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 SNORA72.7-201ENST00000516349 94 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-781P-201ENST00000516377 101 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-586P-201ENST00000517265 104 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 Pinc.1-201ENST00000616452 154 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 AC006435.5-201ENST00000624486 112 ntBASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
ZC3H4Q9UPT8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 MAPK10-373ENST00000641983 6772 ntBASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 Y_RNA.309-201ENST00000365046 111 ntBASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 SNORD21-201ENST00000383953 95 ntBASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 RNU6-1083P-201ENST00000384022 107 ntBASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 RPS26P45-201ENST00000471748 340 ntBASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 RNU1-104P-201ENST00000517280 175 ntBASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 RNU2-60P-201ENST00000517290 128 ntBASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 MIR4438-201ENST00000585271 93 ntBASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 JPX_2.1-201ENST00000614161 69 ntBASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZC3H4Q9UPT8 MIR184-201ENST00000384962 84 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 MIR1261-201ENST00000408659 82 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 Y_RNA.621-201ENST00000411065 96 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 RPL30P4-201ENST00000429309 333 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 SCARNA17.1-201ENST00000516211 143 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 SCARNA17.2-201ENST00000516334 143 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 RNU7-149P-201ENST00000516739 59 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 RNU7-172P-201ENST00000517125 64 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 MIR4435-1-201ENST00000582552 80 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 MIR3117-201ENST00000584034 78 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 AC004832.5-201ENST00000608677 401 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 SCARNA17.4-201ENST00000614296 143 ntBASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.03□□□□□ -1.76
ZC3H4Q9UPT8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ZC3H4Q9UPT8 RNU6-1209P-201ENST00000363655 107 ntBASIC4.02□□□□□ -1.77
ZC3H4Q9UPT8 SNORA7.4-201ENST00000384249 137 ntBASIC4.02□□□□□ -1.77
ZC3H4Q9UPT8 RNU6-880P-201ENST00000384526 107 ntBASIC4.02□□□□□ -1.77
ZC3H4Q9UPT8 AC016909.1-201ENST00000415916 166 ntBASIC4.02□□□□□ -1.77
ZC3H4Q9UPT8 AC009414.1-201ENST00000427200 443 ntBASIC4.02□□□□□ -1.77
ZC3H4Q9UPT8 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.02□□□□□ -1.77
ZC3H4Q9UPT8 Y_RNA.649-201ENST00000459077 103 ntBASIC4.02□□□□□ -1.77
ZC3H4Q9UPT8 NDUFB9P3-201ENST00000521269 501 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms