Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.06□□□□□ -1.92
RNF38Q9H0F5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNF38Q9H0F5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.06□□□□□ -1.92
RNF38Q9H0F5 Y_RNA.273-201ENST00000364703 102 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF38Q9H0F5 SNORD116-13-201ENST00000384408 92 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 Y_RNA.521-201ENST00000384560 114 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 RNU6-768P-201ENST00000384683 107 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 MIR518C-201ENST00000384822 101 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 MIR586-201ENST00000385035 97 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 RNU6-220P-201ENST00000390919 107 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 SNORA26.7-201ENST00000391288 122 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 AL035461.1-201ENST00000421490 332 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.05□□□□□ -1.92
RNF38Q9H0F5 AL445687.1-201ENST00000439946 251 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 AC090515.1-201ENST00000465295 476 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 AC091826.1-201ENST00000514065 313 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 RNA5SP367-201ENST00000516557 118 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.05□□□□□ -1.92
RNF38Q9H0F5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
RNF38Q9H0F5 MIR548AY-201ENST00000617669 107 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 MIR5739-201ENST00000619803 80 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 AL035425.3-201ENST00000564206 4996 ntBASIC3.05□□□□□ -1.92
RNF38Q9H0F5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
RNF38Q9H0F5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
RNF38Q9H0F5 RNU6-728P-201ENST00000365375 104 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 MIR539-201ENST00000365690 78 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 RNU6-851P-201ENST00000384565 107 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 FO393413.1-201ENST00000402892 195 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 AL355796.1-201ENST00000406706 323 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 MIR1185-2-201ENST00000408687 86 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 AC104332.2-201ENST00000429959 156 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 AC092427.1-202ENST00000430569 476 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 AL121890.1-201ENST00000435457 205 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 RNU7-197P-201ENST00000458836 62 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 AC092991.1-201ENST00000477176 376 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.04□□□□□ -1.92
RNF38Q9H0F5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.04□□□□□ -1.92
RNF38Q9H0F5 RNU6-1337P-201ENST00000516525 95 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 SNORA31.26-201ENST00000517250 137 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 GTF3AP2-201ENST00000557014 266 ntBASIC3.04□□□□□ -1.92
RNF38Q9H0F5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF38Q9H0F5 AC093010.3-201ENST00000570269 15214 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 RNY1P11-201ENST00000363759 113 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 SNORD32B-201ENST00000364460 84 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 RNU6-80P-201ENST00000384195 107 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 MIR29B2-201ENST00000385055 81 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 RNU6-1228P-201ENST00000391014 107 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 MIR887-201ENST00000401258 79 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 RNU6-588P-201ENST00000410281 105 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 SNORA36B-201ENST00000410438 131 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 Y_RNA.622-201ENST00000411091 108 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF38Q9H0F5 EEF1B2P7-201ENST00000451177 676 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 RN7SL75P-201ENST00000461926 281 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 CKS1BP2-201ENST00000497342 240 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.03□□□□□ -1.92
RNF38Q9H0F5 MIR6844-201ENST00000637122 62 ntBASIC3.03□□□□□ -1.92
RNF38Q9H0F5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF38Q9H0F5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF38Q9H0F5 SNORA20B-201ENST00000384220 132 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 MIR873-201ENST00000401120 77 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 RNA5SP274-201ENST00000410484 108 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.02□□□□□ -1.93
RNF38Q9H0F5 RPL23AP7-203ENST00000449021 469 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.02□□□□□ -1.93
RNF38Q9H0F5 RNU7-14P-201ENST00000459331 62 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 RNU7-57P-201ENST00000459540 60 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 RNU7-115P-201ENST00000516433 55 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 RNU2-56P-201ENST00000516826 190 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 RNU6-586P-201ENST00000517265 104 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.02□□□□□ -1.93
RNF38Q9H0F5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 TUG1_4.1-201ENST00000619464 181 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF38Q9H0F5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.02□□□□□ -1.93
RNF38Q9H0F5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RNF38Q9H0F5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RNF38Q9H0F5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RNF38Q9H0F5 RNU6-1325P-201ENST00000364905 105 ntBASIC3.01□□□□□ -1.93
RNF38Q9H0F5 RNU6-144P-201ENST00000383951 107 ntBASIC3.01□□□□□ -1.93
RNF38Q9H0F5 CYP2C59P-201ENST00000457790 269 ntBASIC3.01□□□□□ -1.93
RNF38Q9H0F5 UBE2DNL-203ENST00000474922 222 ntBASIC3.01□□□□□ -1.93
RNF38Q9H0F5 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
RNF38Q9H0F5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF38Q9H0F5 RNA5SP356-201ENST00000515972 94 ntBASIC3.01□□□□□ -1.93
RNF38Q9H0F5 RNU6-919P-201ENST00000516731 104 ntBASIC3.01□□□□□ -1.93
RNF38Q9H0F5 ELOCP29-201ENST00000588193 334 ntBASIC3.01□□□□□ -1.93
RNF38Q9H0F5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
RNF38Q9H0F5 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.01□□□□□ -1.93
RNF38Q9H0F5 AC012640.5-201ENST00000623897 319 ntBASIC3.01□□□□□ -1.93
RNF38Q9H0F5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RNF38Q9H0F5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
RNF38Q9H0F5 AC096644.4-201ENST00000563417 2912 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3□□□□□ -1.93
RNF38Q9H0F5 AL356292.1-201ENST00000283110 373 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 SNORD56.5-201ENST00000364281 72 ntBASIC3□□□□□ -1.93
RNF38Q9H0F5 Y_RNA.500-201ENST00000384466 111 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms