Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.21□□□□□ -1.9
ZNF428Q96B54 AP003733.2-201ENST00000529409 171 ntBASIC3.21□□□□□ -1.9
ZNF428Q96B54 SNORD53-201ENST00000579969 78 ntBASIC3.21□□□□□ -1.9
ZNF428Q96B54 AC069114.2-201ENST00000604699 304 ntBASIC3.21□□□□□ -1.9
ZNF428Q96B54 AC022202.1-201ENST00000613515 211 ntBASIC3.21□□□□□ -1.9
ZNF428Q96B54 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.21□□□□□ -1.9
ZNF428Q96B54 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.21□□□□□ -1.9
ZNF428Q96B54 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.21□□□□□ -1.9
ZNF428Q96B54 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.21□□□□□ -1.9
ZNF428Q96B54 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ZNF428Q96B54 Y_RNA.60-201ENST00000362831 98 ntBASIC3.2□□□□□ -1.9
ZNF428Q96B54 SNORD115-3-201ENST00000363100 82 ntBASIC3.2□□□□□ -1.9
ZNF428Q96B54 Y_RNA.101-201ENST00000363154 102 ntBASIC3.2□□□□□ -1.9
ZNF428Q96B54 SNORD113-8-201ENST00000363497 74 ntBASIC3.2□□□□□ -1.9
ZNF428Q96B54 Y_RNA.447-201ENST00000384184 113 ntBASIC3.2□□□□□ -1.9
ZNF428Q96B54 SNORA20B-201ENST00000384220 132 ntBASIC3.2□□□□□ -1.9
ZNF428Q96B54 AL359511.1-201ENST00000402970 211 ntBASIC3.2□□□□□ -1.9
ZNF428Q96B54 U3.40-201ENST00000408706 208 ntBASIC3.2□□□□□ -1.9
ZNF428Q96B54 BX510359.4-201ENST00000423750 193 ntBASIC3.2□□□□□ -1.9
ZNF428Q96B54 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF428Q96B54 U6.73-201ENST00000619194 103 ntBASIC3.2□□□□□ -1.9
ZNF428Q96B54 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF428Q96B54 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF428Q96B54 Y_RNA.16-201ENST00000362421 102 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 snoU2_19.2-201ENST00000363024 80 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 Y_RNA.136-201ENST00000363444 102 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 RNU1-96P-201ENST00000364163 162 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 RNU6-102P-201ENST00000384485 104 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 SNORA3.2-201ENST00000408221 125 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 HMGN2P34-201ENST00000437647 269 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF428Q96B54 MRPS10P1-201ENST00000448483 130 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 RPL23AP7-203ENST00000449021 469 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 RPL36AP21-201ENST00000490372 323 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 RNU6-1278P-201ENST00000516130 107 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 RNU6-496P-201ENST00000516145 99 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 RNU1-41P-201ENST00000516161 162 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 RNU1-48P-201ENST00000516400 162 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 RNU6-826P-201ENST00000516827 104 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF428Q96B54 MIR3670-2-201ENST00000582974 65 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 MIR3670-1-201ENST00000584160 65 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 MIR3670-3-201ENST00000584855 65 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 AC046143.2-201ENST00000609789 160 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 AC062037.2-201ENST00000610137 73 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 MIR3670-4-201ENST00000612260 65 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.19□□□□□ -1.9
ZNF428Q96B54 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF428Q96B54 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.18□□□□□ -1.9
ZNF428Q96B54 RNU6-1019P-201ENST00000364424 107 ntBASIC3.18□□□□□ -1.9
ZNF428Q96B54 RNU6-326P-201ENST00000365480 107 ntBASIC3.18□□□□□ -1.9
ZNF428Q96B54 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
ZNF428Q96B54 AL117342.1-201ENST00000404861 406 ntBASIC3.18□□□□□ -1.9
ZNF428Q96B54 RNU6-1199P-201ENST00000411249 104 ntBASIC3.18□□□□□ -1.9
ZNF428Q96B54 RPS15AP28-201ENST00000435088 386 ntBASIC3.18□□□□□ -1.9
ZNF428Q96B54 POLR2KP2-201ENST00000438155 177 ntBASIC3.18□□□□□ -1.9
ZNF428Q96B54 AC055731.1-201ENST00000474387 401 ntBASIC3.18□□□□□ -1.9
ZNF428Q96B54 RNU7-99P-201ENST00000516271 62 ntBASIC3.18□□□□□ -1.9
ZNF428Q96B54 MIR3128-201ENST00000581957 66 ntBASIC3.18□□□□□ -1.9
ZNF428Q96B54 AP001282.2-201ENST00000616149 309 ntBASIC3.18□□□□□ -1.9
ZNF428Q96B54 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF428Q96B54 MIR6073-201ENST00000352083 89 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 RNU6-290P-201ENST00000365212 101 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 SNORA6-201ENST00000384033 151 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 Y_RNA.518-201ENST00000384552 113 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 AL031003.1-201ENST00000404229 172 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 RNA5SP450-201ENST00000411206 102 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF428Q96B54 SNORD127-201ENST00000458892 86 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 U8.19-201ENST00000459095 133 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 RPS26P55-201ENST00000471178 356 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 HMGB3P17-201ENST00000504195 649 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 RNU1-142P-201ENST00000516682 145 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 AC012640.5-201ENST00000623897 319 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.17□□□□□ -1.9
ZNF428Q96B54 AC010615.1-201ENST00000594254 1764 ntBASIC3.17□□□□□ -1.9
ZNF428Q96B54 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF428Q96B54 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF428Q96B54 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF428Q96B54 Z98742.3-201ENST00000418637 326 ntBASIC3.16□□□□□ -1.9
ZNF428Q96B54 EBAG9P1-201ENST00000418955 543 ntBASIC3.16□□□□□ -1.9
ZNF428Q96B54 HMGN2P3-201ENST00000433603 273 ntBASIC3.16□□□□□ -1.9
ZNF428Q96B54 HMGN2P5-201ENST00000436882 273 ntBASIC3.16□□□□□ -1.9
ZNF428Q96B54 RNU6-436P-201ENST00000516171 114 ntBASIC3.16□□□□□ -1.9
ZNF428Q96B54 RNU6-1041P-201ENST00000516254 102 ntBASIC3.16□□□□□ -1.9
ZNF428Q96B54 RPL21P9-201ENST00000556149 474 ntBASIC3.16□□□□□ -1.9
ZNF428Q96B54 AC005357.1-201ENST00000588399 301 ntBASIC3.16□□□□□ -1.9
ZNF428Q96B54 AC012433.1-201ENST00000588916 398 ntBASIC3.16□□□□□ -1.9
ZNF428Q96B54 AC067747.1-201ENST00000608026 250 ntBASIC3.16□□□□□ -1.9
ZNF428Q96B54 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC3.15□□□□□ -1.9
ZNF428Q96B54 MIR335-201ENST00000362173 94 ntBASIC3.15□□□□□ -1.91
ZNF428Q96B54 MT-TG-201ENST00000387429 68 ntBASIC3.15□□□□□ -1.91
ZNF428Q96B54 RNA5SP212-201ENST00000391223 107 ntBASIC3.15□□□□□ -1.91
ZNF428Q96B54 AL355796.1-201ENST00000406706 323 ntBASIC3.15□□□□□ -1.91
ZNF428Q96B54 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.15□□□□□ -1.91
ZNF428Q96B54 MIR1302-6-201ENST00000408466 90 ntBASIC3.15□□□□□ -1.91
ZNF428Q96B54 RNU2-61P-201ENST00000411069 191 ntBASIC3.15□□□□□ -1.91
ZNF428Q96B54 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF428Q96B54 AL158823.1-201ENST00000418441 478 ntBASIC3.15□□□□□ -1.91
ZNF428Q96B54 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms