Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AC120024.3-201ENST00000603167 156 ntBASIC3.77□□□□□ -1.81
USP17L3A6NCW0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USP17L3A6NCW0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
USP17L3A6NCW0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
USP17L3A6NCW0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.76□□□□□ -1.81
USP17L3A6NCW0 Y_RNA.332-201ENST00000365271 113 ntBASIC3.76□□□□□ -1.81
USP17L3A6NCW0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.76□□□□□ -1.81
USP17L3A6NCW0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.76□□□□□ -1.81
USP17L3A6NCW0 RPS4XP11-201ENST00000446897 772 ntBASIC3.76□□□□□ -1.81
USP17L3A6NCW0 RNU6-1234P-201ENST00000516877 103 ntBASIC3.76□□□□□ -1.81
USP17L3A6NCW0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.76□□□□□ -1.81
USP17L3A6NCW0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP17L3A6NCW0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
USP17L3A6NCW0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP17L3A6NCW0 MIR22-201ENST00000362190 85 ntBASIC3.75□□□□□ -1.81
USP17L3A6NCW0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.75□□□□□ -1.81
USP17L3A6NCW0 RNU6-484P-201ENST00000384016 107 ntBASIC3.75□□□□□ -1.81
USP17L3A6NCW0 MIR1183-201ENST00000408856 89 ntBASIC3.75□□□□□ -1.81
USP17L3A6NCW0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.75□□□□□ -1.81
USP17L3A6NCW0 AC022018.1-201ENST00000430685 241 ntBASIC3.75□□□□□ -1.81
USP17L3A6NCW0 AL139132.1-201ENST00000431587 344 ntBASIC3.75□□□□□ -1.81
USP17L3A6NCW0 RNA5SP356-201ENST00000515972 94 ntBASIC3.75□□□□□ -1.81
USP17L3A6NCW0 RNU6-991P-201ENST00000516168 107 ntBASIC3.75□□□□□ -1.81
USP17L3A6NCW0 RNU2-56P-201ENST00000516826 190 ntBASIC3.75□□□□□ -1.81
USP17L3A6NCW0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.75□□□□□ -1.81
USP17L3A6NCW0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP17L3A6NCW0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.75□□□□□ -1.81
USP17L3A6NCW0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.75□□□□□ -1.81
USP17L3A6NCW0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.75□□□□□ -1.81
USP17L3A6NCW0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.74□□□□□ -1.81
USP17L3A6NCW0 SNORA25.7-201ENST00000364375 127 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 Y_RNA.251-201ENST00000364551 99 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 SNORD67-201ENST00000390833 111 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.74□□□□□ -1.81
USP17L3A6NCW0 RN7SL429P-201ENST00000479090 223 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 RN7SL489P-201ENST00000486185 223 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 RN7SL327P-201ENST00000488659 223 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 RNU4-57P-201ENST00000515980 135 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 RNU6-1146P-201ENST00000516282 102 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 GTF3AP2-201ENST00000557014 266 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 RPL23AP91-201ENST00000569211 455 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 MIR4425-201ENST00000580572 84 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.74□□□□□ -1.81
USP17L3A6NCW0 RN7SL853P-201ENST00000617250 223 ntBASIC3.74□□□□□ -1.81
USP17L3A6NCW0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP17L3A6NCW0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
USP17L3A6NCW0 Y_RNA.353-201ENST00000365440 108 ntBASIC3.73□□□□□ -1.81
USP17L3A6NCW0 Y_RNA.584-201ENST00000391090 114 ntBASIC3.73□□□□□ -1.81
USP17L3A6NCW0 AC063976.3-201ENST00000426849 329 ntBASIC3.73□□□□□ -1.81
USP17L3A6NCW0 AC245102.2-201ENST00000448956 180 ntBASIC3.73□□□□□ -1.81
USP17L3A6NCW0 AC091826.1-201ENST00000514065 313 ntBASIC3.73□□□□□ -1.81
USP17L3A6NCW0 RNA5SP153-201ENST00000516498 76 ntBASIC3.73□□□□□ -1.81
USP17L3A6NCW0 AC011604.1-201ENST00000545978 196 ntBASIC3.73□□□□□ -1.81
USP17L3A6NCW0 MIR3117-201ENST00000584034 78 ntBASIC3.73□□□□□ -1.81
USP17L3A6NCW0 AL355297.2-201ENST00000604792 129 ntBASIC3.73□□□□□ -1.81
USP17L3A6NCW0 uc_338.4-201ENST00000616635 176 ntBASIC3.73□□□□□ -1.81
USP17L3A6NCW0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
USP17L3A6NCW0 RNU6-1082P-201ENST00000364574 107 ntBASIC3.72□□□□□ -1.81
USP17L3A6NCW0 RNU6-915P-201ENST00000364943 103 ntBASIC3.72□□□□□ -1.81
USP17L3A6NCW0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
USP17L3A6NCW0 RNU11-5P-201ENST00000391216 129 ntBASIC3.72□□□□□ -1.81
USP17L3A6NCW0 RNU2-70P-201ENST00000410718 179 ntBASIC3.72□□□□□ -1.81
USP17L3A6NCW0 HMGN2P34-201ENST00000437647 269 ntBASIC3.72□□□□□ -1.81
USP17L3A6NCW0 SNORD77.4-201ENST00000516158 81 ntBASIC3.72□□□□□ -1.81
USP17L3A6NCW0 RNU6-126P-201ENST00000516685 103 ntBASIC3.72□□□□□ -1.81
USP17L3A6NCW0 ELOCP29-201ENST00000588193 334 ntBASIC3.72□□□□□ -1.81
USP17L3A6NCW0 U6.73-201ENST00000619194 103 ntBASIC3.72□□□□□ -1.81
USP17L3A6NCW0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP17L3A6NCW0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP17L3A6NCW0 MIR449A-201ENST00000362113 91 ntBASIC3.71□□□□□ -1.82
USP17L3A6NCW0 RNU6-301P-201ENST00000384277 107 ntBASIC3.71□□□□□ -1.82
USP17L3A6NCW0 MIR520G-201ENST00000385064 90 ntBASIC3.71□□□□□ -1.82
USP17L3A6NCW0 MIR561-201ENST00000385216 97 ntBASIC3.71□□□□□ -1.82
USP17L3A6NCW0 AL135938.1-201ENST00000443141 297 ntBASIC3.71□□□□□ -1.82
USP17L3A6NCW0 RN7SKP179-201ENST00000516126 217 ntBASIC3.71□□□□□ -1.82
USP17L3A6NCW0 RNA5SP367-201ENST00000516557 118 ntBASIC3.71□□□□□ -1.82
USP17L3A6NCW0 MIR3162-201ENST00000581818 82 ntBASIC3.71□□□□□ -1.82
USP17L3A6NCW0 U2.20-201ENST00000613956 192 ntBASIC3.71□□□□□ -1.82
USP17L3A6NCW0 JPX_2.1-201ENST00000614161 69 ntBASIC3.71□□□□□ -1.82
USP17L3A6NCW0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP17L3A6NCW0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
USP17L3A6NCW0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.71□□□□□ -1.82
USP17L3A6NCW0 AL355596.1-201ENST00000565399 3996 ntBASIC3.71□□□□□ -1.82
USP17L3A6NCW0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.71□□□□□ -1.82
USP17L3A6NCW0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.71□□□□□ -1.82
USP17L3A6NCW0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP17L3A6NCW0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.71□□□□□ -1.82
USP17L3A6NCW0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP17L3A6NCW0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.7□□□□□ -1.82
USP17L3A6NCW0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP17L3A6NCW0 RNU6-978P-201ENST00000364371 103 ntBASIC3.7□□□□□ -1.82
USP17L3A6NCW0 SNORD21-201ENST00000383953 95 ntBASIC3.7□□□□□ -1.82
USP17L3A6NCW0 SNORD20-201ENST00000384550 80 ntBASIC3.7□□□□□ -1.82
USP17L3A6NCW0 SNORA26-201ENST00000391286 122 ntBASIC3.7□□□□□ -1.82
USP17L3A6NCW0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.7□□□□□ -1.82
USP17L3A6NCW0 Y_RNA.686-201ENST00000516548 134 ntBASIC3.7□□□□□ -1.82
USP17L3A6NCW0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.7□□□□□ -1.82
USP17L3A6NCW0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.7□□□□□ -1.82
USP17L3A6NCW0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP17L3A6NCW0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms