Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MIR181A2-201ENST00000384863 110 ntBASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 RNA5SP511-201ENST00000410487 115 ntBASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 AL162725.1-201ENST00000435405 301 ntBASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 AL445687.1-201ENST00000439946 251 ntBASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 RPL23AP54-201ENST00000495129 419 ntBASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 AC097462.1-201ENST00000514125 324 ntBASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 SCARNA13-201ENST00000516672 275 ntBASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 AC109810.1-201ENST00000534066 224 ntBASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 MIR4431-201ENST00000579990 94 ntBASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 U2.20-201ENST00000613956 192 ntBASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNAP47Q5SQN1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNAP47Q5SQN1 RNU4-13P-201ENST00000364019 141 ntBASIC3.16□□□□□ -1.9
SNAP47Q5SQN1 MIR627-201ENST00000384979 97 ntBASIC3.16□□□□□ -1.9
SNAP47Q5SQN1 MIR613-201ENST00000385248 95 ntBASIC3.16□□□□□ -1.9
SNAP47Q5SQN1 TMSB4XP3-201ENST00000445144 114 ntBASIC3.16□□□□□ -1.9
SNAP47Q5SQN1 RNA5SP341-201ENST00000516261 117 ntBASIC3.16□□□□□ -1.9
SNAP47Q5SQN1 SNORA64.4-201ENST00000516632 81 ntBASIC3.16□□□□□ -1.9
SNAP47Q5SQN1 AC107934.2-201ENST00000518653 310 ntBASIC3.16□□□□□ -1.9
SNAP47Q5SQN1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.16□□□□□ -1.9
SNAP47Q5SQN1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SNAP47Q5SQN1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SNAP47Q5SQN1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 MT-TT-201ENST00000387460 66 ntBASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 MIR1253-201ENST00000408273 105 ntBASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 RN7SKP220-201ENST00000410611 288 ntBASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 SRIP3-201ENST00000413200 219 ntBASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 AC060773.1-201ENST00000421698 310 ntBASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 RNU6-437P-201ENST00000459408 95 ntBASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 RNU7-172P-201ENST00000517125 64 ntBASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 MIR4506-201ENST00000584693 77 ntBASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 AC004832.5-201ENST00000608677 401 ntBASIC3.15□□□□□ -1.91
SNAP47Q5SQN1 AL356274.2-201ENST00000624379 3752 ntBASIC3.14□□□□□ -1.91
SNAP47Q5SQN1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.14□□□□□ -1.91
SNAP47Q5SQN1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNAP47Q5SQN1 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
SNAP47Q5SQN1 SNORD50.2-201ENST00000365465 70 ntBASIC3.14□□□□□ -1.91
SNAP47Q5SQN1 RNU6-239P-201ENST00000390990 99 ntBASIC3.14□□□□□ -1.91
SNAP47Q5SQN1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.14□□□□□ -1.91
SNAP47Q5SQN1 RN7SL863P-201ENST00000462370 296 ntBASIC3.14□□□□□ -1.91
SNAP47Q5SQN1 uc_338.1-201ENST00000612113 180 ntBASIC3.14□□□□□ -1.91
SNAP47Q5SQN1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNAP47Q5SQN1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
SNAP47Q5SQN1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 RNU1-70P-201ENST00000362618 164 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 RNU6-704P-201ENST00000364162 103 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 MIR634-201ENST00000385208 97 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 RNU6-1228P-201ENST00000391014 107 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 AL606845.1-201ENST00000404881 255 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 BMS1P22-201ENST00000414726 313 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 HMGN2P34-201ENST00000437647 269 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 AC107027.2-201ENST00000512197 115 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 AC104027.1-201ENST00000521887 300 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 MIR5004-201ENST00000579078 107 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 MIR4325-201ENST00000583049 90 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 AL449363.1-201ENST00000617815 186 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 U4atac.1-201ENST00000618345 95 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 U6.73-201ENST00000619194 103 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 AC132825.6-201ENST00000638861 357 ntBASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNAP47Q5SQN1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 AC017071.1-201ENST00000564407 2204 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 MIR422A-201ENST00000362286 90 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 RNU6-674P-201ENST00000363831 107 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 SNORA72-201ENST00000384339 132 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 RNU6-136P-201ENST00000384663 107 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 RNU4-47P-201ENST00000410876 114 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 AC092427.1-202ENST00000430569 476 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 AC244505.4-201ENST00000434905 287 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 AC009238.1-201ENST00000442165 424 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 SSXP5-201ENST00000443473 287 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 AC009237.6-201ENST00000446969 424 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 AC011406.1-201ENST00000512440 370 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 RNU6-1146P-201ENST00000516282 102 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 NDUFA5P6-201ENST00000542110 379 ntBASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SNAP47Q5SQN1 AC008264.2-201ENST00000610193 3731 ntBASIC3.11□□□□□ -1.91
SNAP47Q5SQN1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SNAP47Q5SQN1 snoU2-30.2-201ENST00000362805 70 ntBASIC3.11□□□□□ -1.91
SNAP47Q5SQN1 Y_RNA.99-201ENST00000363138 105 ntBASIC3.11□□□□□ -1.91
SNAP47Q5SQN1 Y_RNA.400-201ENST00000383963 111 ntBASIC3.11□□□□□ -1.91
SNAP47Q5SQN1 RNU6-376P-201ENST00000384731 106 ntBASIC3.11□□□□□ -1.91
SNAP47Q5SQN1 Z96811.1-201ENST00000445880 108 ntBASIC3.11□□□□□ -1.91
SNAP47Q5SQN1 RPS4XP11-201ENST00000446897 772 ntBASIC3.11□□□□□ -1.91
SNAP47Q5SQN1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
SNAP47Q5SQN1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms