Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SPG7Q9UQ90 RNU6-1048P-201ENST00000364054 107 ntBASIC3.58□□□□□ -1.84
SPG7Q9UQ90 SNORA68.1-201ENST00000364537 132 ntBASIC3.58□□□□□ -1.84
SPG7Q9UQ90 Y_RNA.435-201ENST00000384095 112 ntBASIC3.58□□□□□ -1.84
SPG7Q9UQ90 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SPG7Q9UQ90 RNU6-1278P-201ENST00000516130 107 ntBASIC3.58□□□□□ -1.84
SPG7Q9UQ90 RNU6-1219P-201ENST00000516143 112 ntBASIC3.58□□□□□ -1.84
SPG7Q9UQ90 RNU6-1212P-201ENST00000517023 104 ntBASIC3.58□□□□□ -1.84
SPG7Q9UQ90 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.58□□□□□ -1.84
SPG7Q9UQ90 AL078604.3-201ENST00000615580 211 ntBASIC3.58□□□□□ -1.84
SPG7Q9UQ90 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPG7Q9UQ90 MIR26A1-201ENST00000362205 77 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 Y_RNA.240-201ENST00000364469 95 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 Y_RNA.287-201ENST00000364853 94 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 Y_RNA.341-201ENST00000365341 102 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 Y_RNA.361-201ENST00000365515 120 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPG7Q9UQ90 RNU6-746P-201ENST00000384112 109 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.57□□□□□ -1.84
SPG7Q9UQ90 TRIAP1P1-201ENST00000427062 225 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.57□□□□□ -1.84
SPG7Q9UQ90 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 SNORA70.12-201ENST00000516084 153 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.57□□□□□ -1.84
SPG7Q9UQ90 AC018630.3-201ENST00000542637 96 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.57□□□□□ -1.84
SPG7Q9UQ90 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SPG7Q9UQ90 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.57□□□□□ -1.84
SPG7Q9UQ90 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SPG7Q9UQ90 AC134026.1-201ENST00000623249 2239 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 snoZ196.1-201ENST00000625269 89 ntBASIC3.57□□□□□ -1.84
SPG7Q9UQ90 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SPG7Q9UQ90 MTCO2P33-201ENST00000402100 465 ntBASIC3.56□□□□□ -1.84
SPG7Q9UQ90 FO393413.1-201ENST00000402892 195 ntBASIC3.56□□□□□ -1.84
SPG7Q9UQ90 RNU6-57P-201ENST00000411348 103 ntBASIC3.56□□□□□ -1.84
SPG7Q9UQ90 AC016717.1-201ENST00000448918 286 ntBASIC3.56□□□□□ -1.84
SPG7Q9UQ90 CKS1BP2-201ENST00000497342 240 ntBASIC3.56□□□□□ -1.84
SPG7Q9UQ90 RNA5SP148-201ENST00000516527 94 ntBASIC3.56□□□□□ -1.84
SPG7Q9UQ90 MIR3133-201ENST00000583157 78 ntBASIC3.56□□□□□ -1.84
SPG7Q9UQ90 AC004832.5-201ENST00000608677 401 ntBASIC3.56□□□□□ -1.84
SPG7Q9UQ90 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
SPG7Q9UQ90 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SPG7Q9UQ90 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SPG7Q9UQ90 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.55□□□□□ -1.84
SPG7Q9UQ90 Z82209.1-201ENST00000422141 2135 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 Y_RNA.124-201ENST00000363339 93 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 SNORD31B-201ENST00000364977 69 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 Y_RNA.368-201ENST00000365547 113 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 RNU4-17P-201ENST00000365598 141 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 SNORD21-201ENST00000383953 95 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 SNORA72.4-201ENST00000384174 132 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 RNU6-975P-201ENST00000384296 105 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 TRBV12-1-201ENST00000479785 344 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 AC023141.11-201ENST00000508864 202 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 MRPS18CP4-201ENST00000535821 231 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 MIR3684-201ENST00000579779 74 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 AC013791.1-201ENST00000616619 62 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 MIR5739-201ENST00000619803 80 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 AC021753.1-201ENST00000635724 168 ntBASIC3.55□□□□□ -1.84
SPG7Q9UQ90 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SPG7Q9UQ90 Y_RNA.456-201ENST00000384232 111 ntBASIC3.54□□□□□ -1.84
SPG7Q9UQ90 SNORA67.4-201ENST00000384688 142 ntBASIC3.54□□□□□ -1.84
SPG7Q9UQ90 Y_RNA.571-201ENST00000384753 98 ntBASIC3.54□□□□□ -1.84
SPG7Q9UQ90 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.54□□□□□ -1.84
SPG7Q9UQ90 AC091021.1-201ENST00000468051 388 ntBASIC3.54□□□□□ -1.84
SPG7Q9UQ90 AC003982.1-202ENST00000469928 248 ntBASIC3.54□□□□□ -1.84
SPG7Q9UQ90 SUMO2P18-201ENST00000518873 252 ntBASIC3.54□□□□□ -1.84
SPG7Q9UQ90 AC100767.1-201ENST00000528178 123 ntBASIC3.54□□□□□ -1.84
SPG7Q9UQ90 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.54□□□□□ -1.84
SPG7Q9UQ90 AC025754.2-201ENST00000606491 432 ntBASIC3.54□□□□□ -1.84
SPG7Q9UQ90 AL590808.1-201ENST00000618696 141 ntBASIC3.54□□□□□ -1.84
SPG7Q9UQ90 MIR1248-201ENST00000629190 106 ntBASIC3.54□□□□□ -1.84
SPG7Q9UQ90 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SPG7Q9UQ90 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SPG7Q9UQ90 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.54□□□□□ -1.84
SPG7Q9UQ90 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.53□□□□□ -1.84
SPG7Q9UQ90 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SPG7Q9UQ90 Y_RNA.293-201ENST00000364908 93 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 RNU6-438P-201ENST00000365561 103 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SPG7Q9UQ90 AL355796.1-201ENST00000406706 323 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 RNU2-2P-201ENST00000410396 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 RNU2-32P-201ENST00000411193 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.53□□□□□ -1.84
SPG7Q9UQ90 RNU2-4P-201ENST00000606190 192 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 AC104465.1-201ENST00000611365 139 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 U2.15-201ENST00000611544 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 U2.16-201ENST00000613119 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 U2.12-201ENST00000613778 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 U2.9-201ENST00000615427 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 U2.11-201ENST00000616345 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 U2.2-201ENST00000616535 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 U2.3-201ENST00000617785 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 U2.19-201ENST00000618602 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 RNU2-1-201ENST00000618664 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 U2.6-201ENST00000619225 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 U2.5-201ENST00000619465 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 U2.10-201ENST00000620268 191 ntBASIC3.53□□□□□ -1.84
SPG7Q9UQ90 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.53□□□□□ -1.84
SPG7Q9UQ90 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms