Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 AC010401.1-201ENST00000463867 348 ntBASIC3.14□□□□□ -1.91
HDAC8Q9BY41 AC008885.1-201ENST00000514930 301 ntBASIC3.14□□□□□ -1.91
HDAC8Q9BY41 RNU6-561P-201ENST00000516222 102 ntBASIC3.14□□□□□ -1.91
HDAC8Q9BY41 RNU6-971P-201ENST00000516920 106 ntBASIC3.14□□□□□ -1.91
HDAC8Q9BY41 AC027419.1-201ENST00000522976 328 ntBASIC3.14□□□□□ -1.91
HDAC8Q9BY41 AC002064.3-201ENST00000623448 346 ntBASIC3.14□□□□□ -1.91
HDAC8Q9BY41 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HDAC8Q9BY41 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HDAC8Q9BY41 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HDAC8Q9BY41 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HDAC8Q9BY41 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HDAC8Q9BY41 AL356292.1-201ENST00000283110 373 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 RNU1-72P-201ENST00000362976 153 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 Y_RNA.81-201ENST00000362997 102 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 RNU6-438P-201ENST00000365561 103 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 MIR539-201ENST00000365690 78 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 Y_RNA.521-201ENST00000384560 114 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 RN7SKP220-201ENST00000410611 288 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 AL135786.1-201ENST00000415892 214 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC8Q9BY41 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 AC016925.1-201ENST00000458303 298 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 RPL23AP54-201ENST00000495129 419 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 RNA5SP20-201ENST00000515976 84 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 RNU6-948P-201ENST00000516374 107 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 AC018630.3-201ENST00000542637 96 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 MIR3646-201ENST00000578301 84 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 AC023043.3-201ENST00000593113 385 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 SNORA50A-202ENST00000629536 136 ntBASIC3.13□□□□□ -1.91
HDAC8Q9BY41 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.13□□□□□ -1.91
HDAC8Q9BY41 RNU6-1235P-201ENST00000384559 107 ntBASIC3.12□□□□□ -1.91
HDAC8Q9BY41 AC008134.1-201ENST00000420943 193 ntBASIC3.12□□□□□ -1.91
HDAC8Q9BY41 RNU6-437P-201ENST00000459408 95 ntBASIC3.12□□□□□ -1.91
HDAC8Q9BY41 RNU6-498P-201ENST00000459468 107 ntBASIC3.12□□□□□ -1.91
HDAC8Q9BY41 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HDAC8Q9BY41 AC013412.1-201ENST00000610687 192 ntBASIC3.12□□□□□ -1.91
HDAC8Q9BY41 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HDAC8Q9BY41 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.12□□□□□ -1.91
HDAC8Q9BY41 AC006435.5-201ENST00000624486 112 ntBASIC3.12□□□□□ -1.91
HDAC8Q9BY41 MIR6844-201ENST00000637122 62 ntBASIC3.12□□□□□ -1.91
HDAC8Q9BY41 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HDAC8Q9BY41 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC8Q9BY41 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC8Q9BY41 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC8Q9BY41 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC8Q9BY41 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
HDAC8Q9BY41 Y_RNA.218-201ENST00000364218 104 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 SNORA54-201ENST00000384281 123 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 RNU4-43P-201ENST00000410628 137 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 RPL30P4-201ENST00000429309 333 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 RPL23AP58-201ENST00000440453 469 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 RPS12P18-201ENST00000442381 270 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 RPS27P1-201ENST00000450552 247 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 RNU6-1211P-201ENST00000459179 105 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC8Q9BY41 RAC1P5-201ENST00000512182 576 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.11□□□□□ -1.91
HDAC8Q9BY41 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC8Q9BY41 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 AC093732.2-201ENST00000607950 274 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 RMST_8.1-201ENST00000610287 165 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC8Q9BY41 TUG1_4.1-201ENST00000619464 181 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC8Q9BY41 AC012640.5-201ENST00000623897 319 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 MIR7157-201ENST00000635801 60 ntBASIC3.11□□□□□ -1.91
HDAC8Q9BY41 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.11□□□□□ -1.91
HDAC8Q9BY41 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HDAC8Q9BY41 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC8Q9BY41 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.1□□□□□ -1.91
HDAC8Q9BY41 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC8Q9BY41 Y_RNA.127-201ENST00000363386 109 ntBASIC3.1□□□□□ -1.91
HDAC8Q9BY41 RNU4-13P-201ENST00000364019 141 ntBASIC3.1□□□□□ -1.91
HDAC8Q9BY41 RNA5SP205-201ENST00000364653 136 ntBASIC3.1□□□□□ -1.91
HDAC8Q9BY41 RNU6-768P-201ENST00000384683 107 ntBASIC3.1□□□□□ -1.91
HDAC8Q9BY41 MIR181A2-201ENST00000384863 110 ntBASIC3.1□□□□□ -1.91
HDAC8Q9BY41 MIR184-201ENST00000384962 84 ntBASIC3.1□□□□□ -1.91
HDAC8Q9BY41 RNU1-101P-201ENST00000391171 127 ntBASIC3.1□□□□□ -1.91
HDAC8Q9BY41 SNORA79-201ENST00000408376 140 ntBASIC3.1□□□□□ -1.91
HDAC8Q9BY41 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.1□□□□□ -1.91
HDAC8Q9BY41 RNU7-197P-201ENST00000458836 62 ntBASIC3.1□□□□□ -1.91
HDAC8Q9BY41 AC025647.1-201ENST00000517879 253 ntBASIC3.1□□□□□ -1.91
HDAC8Q9BY41 NDUFB9P3-201ENST00000521269 501 ntBASIC3.1□□□□□ -1.91
HDAC8Q9BY41 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HDAC8Q9BY41 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC8Q9BY41 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
HDAC8Q9BY41 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC8Q9BY41 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
HDAC8Q9BY41 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.09□□□□□ -1.91
HDAC8Q9BY41 ZNF702P-202ENST00000434269 1966 ntBASIC3.09□□□□□ -1.91
HDAC8Q9BY41 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC8Q9BY41 MAPK10-322ENST00000641485 4530 ntBASIC3.09□□□□□ -1.91
HDAC8Q9BY41 Y_RNA.71-201ENST00000362892 104 ntBASIC3.09□□□□□ -1.91
HDAC8Q9BY41 RNU4-41P-201ENST00000364426 143 ntBASIC3.09□□□□□ -1.91
HDAC8Q9BY41 SNORA71.1-201ENST00000364523 117 ntBASIC3.09□□□□□ -1.91
HDAC8Q9BY41 Y_RNA.261-201ENST00000364631 102 ntBASIC3.09□□□□□ -1.91
HDAC8Q9BY41 SNORD116-14-201ENST00000383894 92 ntBASIC3.09□□□□□ -1.91
HDAC8Q9BY41 SNORD116-17-201ENST00000383929 92 ntBASIC3.09□□□□□ -1.91
HDAC8Q9BY41 Y_RNA.393-201ENST00000383936 102 ntBASIC3.09□□□□□ -1.91
HDAC8Q9BY41 RNU6-418P-201ENST00000384035 107 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms