Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF135Q8IUD6 RAC1P2-201ENST00000511164 579 ntBASIC3.95□□□□□ -1.78
RNF135Q8IUD6 RNU6-762P-201ENST00000517107 102 ntBASIC3.95□□□□□ -1.78
RNF135Q8IUD6 SCARNA11.3-201ENST00000517276 130 ntBASIC3.95□□□□□ -1.78
RNF135Q8IUD6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RNF135Q8IUD6 AC013412.1-201ENST00000610687 192 ntBASIC3.95□□□□□ -1.78
RNF135Q8IUD6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RNF135Q8IUD6 U6.98-201ENST00000637157 84 ntBASIC3.95□□□□□ -1.78
RNF135Q8IUD6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF135Q8IUD6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RNF135Q8IUD6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RNF135Q8IUD6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RNF135Q8IUD6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF135Q8IUD6 RNU6-438P-201ENST00000365561 103 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 RNU6-484P-201ENST00000384016 107 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 SNORA72-201ENST00000384339 132 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 SNORD72-201ENST00000390994 80 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 DBIP2-201ENST00000419076 262 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF135Q8IUD6 AC005326.1-201ENST00000429197 123 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 AC083863.1-201ENST00000438811 231 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 RPL39P40-201ENST00000445481 146 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 AC090515.1-201ENST00000465295 476 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 AL160236.1-201ENST00000556317 195 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.94□□□□□ -1.78
RNF135Q8IUD6 AL049861.1-201ENST00000603130 150 ntBASIC3.94□□□□□ -1.78
RNF135Q8IUD6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF135Q8IUD6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF135Q8IUD6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 RNU6-309P-201ENST00000364573 106 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 RNU6-1131P-201ENST00000364955 107 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 RNU6-1240P-201ENST00000365155 104 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 Y_RNA.558-201ENST00000384685 113 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 AC016909.1-201ENST00000415916 166 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 RPL27AP5-201ENST00000469428 449 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 RPS27P22-201ENST00000478056 241 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 RNU6-1299P-201ENST00000516316 100 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 RNU6-412P-201ENST00000516434 106 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 RNA5SP164-201ENST00000516533 110 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 YPEL5P2-201ENST00000605553 359 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 MTND5P18-201ENST00000445624 1801 ntBASIC3.93□□□□□ -1.78
RNF135Q8IUD6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF135Q8IUD6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF135Q8IUD6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
RNF135Q8IUD6 RNU1-33P-201ENST00000364249 162 ntBASIC3.92□□□□□ -1.78
RNF135Q8IUD6 DYNLT3P1-201ENST00000378574 347 ntBASIC3.92□□□□□ -1.78
RNF135Q8IUD6 RPL30P4-201ENST00000429309 333 ntBASIC3.92□□□□□ -1.78
RNF135Q8IUD6 CKS1BP2-201ENST00000497342 240 ntBASIC3.92□□□□□ -1.78
RNF135Q8IUD6 RNU2-34P-201ENST00000516534 121 ntBASIC3.92□□□□□ -1.78
RNF135Q8IUD6 AC107934.2-201ENST00000518653 310 ntBASIC3.92□□□□□ -1.78
RNF135Q8IUD6 AP003327.1-201ENST00000529684 127 ntBASIC3.92□□□□□ -1.78
RNF135Q8IUD6 MIR3199-1-201ENST00000582434 88 ntBASIC3.92□□□□□ -1.78
RNF135Q8IUD6 AC107294.3-201ENST00000609211 526 ntBASIC3.92□□□□□ -1.78
RNF135Q8IUD6 IPO8P1-201ENST00000455509 3109 ntBASIC3.92□□□□□ -1.78
RNF135Q8IUD6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF135Q8IUD6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF135Q8IUD6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF135Q8IUD6 RNU6-766P-201ENST00000362478 107 ntBASIC3.91□□□□□ -1.78
RNF135Q8IUD6 Y_RNA.281-201ENST00000364774 94 ntBASIC3.91□□□□□ -1.78
RNF135Q8IUD6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF135Q8IUD6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RNF135Q8IUD6 CYCSP4-201ENST00000429682 331 ntBASIC3.91□□□□□ -1.78
RNF135Q8IUD6 RNU7-170P-201ENST00000459303 61 ntBASIC3.91□□□□□ -1.78
RNF135Q8IUD6 RNA5SP208-201ENST00000516156 78 ntBASIC3.91□□□□□ -1.78
RNF135Q8IUD6 AL929325.1-201ENST00000603096 117 ntBASIC3.91□□□□□ -1.78
RNF135Q8IUD6 AP001318.4-201ENST00000616637 121 ntBASIC3.91□□□□□ -1.78
RNF135Q8IUD6 MIR7515-201ENST00000637837 67 ntBASIC3.91□□□□□ -1.78
RNF135Q8IUD6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RNF135Q8IUD6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF135Q8IUD6 AL596211.1-201ENST00000569873 2277 ntBASIC3.91□□□□□ -1.78
RNF135Q8IUD6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
RNF135Q8IUD6 RNU6-1107P-201ENST00000364817 104 ntBASIC3.9□□□□□ -1.79
RNF135Q8IUD6 RNU6-49P-201ENST00000384256 107 ntBASIC3.9□□□□□ -1.79
RNF135Q8IUD6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RNF135Q8IUD6 AC126124.2-201ENST00000413542 321 ntBASIC3.9□□□□□ -1.79
RNF135Q8IUD6 RPS12P18-201ENST00000442381 270 ntBASIC3.9□□□□□ -1.79
RNF135Q8IUD6 RNU6-638P-201ENST00000516582 104 ntBASIC3.9□□□□□ -1.79
RNF135Q8IUD6 RNU6-965P-201ENST00000516721 96 ntBASIC3.9□□□□□ -1.79
RNF135Q8IUD6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF135Q8IUD6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF135Q8IUD6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF135Q8IUD6 RMST_8.1-201ENST00000610287 165 ntBASIC3.9□□□□□ -1.79
RNF135Q8IUD6 MFSD8-236ENST00000641509 4050 ntBASIC3.9□□□□□ -1.79
RNF135Q8IUD6 FAM35DP-201ENST00000323387 2712 ntBASIC3.9□□□□□ -1.79
RNF135Q8IUD6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RNF135Q8IUD6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF135Q8IUD6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms