Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 RNU1-23P-201ENST00000363361 144 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 Y_RNA.203-201ENST00000364106 102 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 Y_RNA.353-201ENST00000365440 108 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 RNU6-484P-201ENST00000384016 107 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 RNU6-136P-201ENST00000384663 107 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 MIR134-201ENST00000385258 73 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 MIR1253-201ENST00000408273 105 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 RN7SKP27-201ENST00000410684 333 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 RPS4XP11-201ENST00000446897 772 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 RPL21P129-201ENST00000491732 478 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 RNU4-57P-201ENST00000515980 135 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 RNU6-1234P-201ENST00000516877 103 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 AC006130.2-201ENST00000586202 326 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 AL929325.1-201ENST00000603096 117 ntBASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.16□□□□□ -1.9
LRFN4Q6PJG9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
LRFN4Q6PJG9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.15□□□□□ -1.9
LRFN4Q6PJG9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.15□□□□□ -1.9
LRFN4Q6PJG9 AL021368.2-201ENST00000606125 5352 ntBASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 RNA5SP124-201ENST00000362739 110 ntBASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 SNORA73.2-201ENST00000364946 201 ntBASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 AC245102.2-201ENST00000448956 180 ntBASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 RNU1-95P-201ENST00000516357 160 ntBASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 RNA5SP153-201ENST00000516498 76 ntBASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 RNU1-128P-201ENST00000516704 160 ntBASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 RNU2-56P-201ENST00000516826 190 ntBASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 AC068647.1-201ENST00000489539 2265 ntBASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LRFN4Q6PJG9 SNORA25.7-201ENST00000364375 127 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 MIR554-201ENST00000384874 96 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 SNORD77.4-201ENST00000516158 81 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 RNU6-1146P-201ENST00000516282 102 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 SNORA70.18-201ENST00000516696 98 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 AC026333.2-201ENST00000542164 106 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 RPL23AP91-201ENST00000569211 455 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 MIR3117-201ENST00000584034 78 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 U2.20-201ENST00000613956 192 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 uc_338.4-201ENST00000616635 176 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 U6.73-201ENST00000619194 103 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 MAPK10-362ENST00000641864 4484 ntBASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRFN4Q6PJG9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 RNU6-978P-201ENST00000364371 103 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 RNU6-1082P-201ENST00000364574 107 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 RNU6-915P-201ENST00000364943 103 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 Y_RNA.584-201ENST00000391090 114 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 SNORD105B-201ENST00000458770 79 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 RN7SL594P-201ENST00000470590 287 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 RNU6-991P-201ENST00000516168 107 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 RNU6-126P-201ENST00000516685 103 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 AC068657.1-201ENST00000520807 306 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 AC011604.1-201ENST00000545978 196 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 AC034105.4-201ENST00000568304 277 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 SNORA51-201ENST00000606420 132 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 AC091953.5-201ENST00000622919 233 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 AP003355.3-201ENST00000623465 114 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 AC093010.3-201ENST00000570269 15214 ntBASIC3.13□□□□□ -1.91
LRFN4Q6PJG9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 RNU6-834P-201ENST00000362367 110 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 RNU6-215P-201ENST00000365169 102 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 SNORA5A-201ENST00000384111 134 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 SNORD20-201ENST00000384550 80 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 MIR520G-201ENST00000385064 90 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 MIR561-201ENST00000385216 97 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 RNU11-5P-201ENST00000391216 129 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 RNU2-48P-201ENST00000410694 191 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 RN7SL542P-201ENST00000467147 294 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 RN7SKP18-201ENST00000516005 275 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 RN7SKP179-201ENST00000516126 217 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 Y_RNA.686-201ENST00000516548 134 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 AL355297.2-201ENST00000604792 129 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 U4.6-201ENST00000621618 127 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 AC039056.2-201ENST00000622261 511 ntBASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRFN4Q6PJG9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
LRFN4Q6PJG9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRFN4Q6PJG9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN4Q6PJG9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRFN4Q6PJG9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRFN4Q6PJG9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRFN4Q6PJG9 SNORA26-201ENST00000391286 122 ntBASIC3.11□□□□□ -1.91
LRFN4Q6PJG9 SNORA48.8-201ENST00000391324 134 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 432 ms