Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NID1P14543 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
NID1P14543 AF117829.1-206ENST00000621883 3802 ntBASIC3.46□□□□□ -1.86
NID1P14543 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NID1P14543 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NID1P14543 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NID1P14543 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NID1P14543 RNU1-22P-201ENST00000363334 158 ntBASIC3.46□□□□□ -1.86
NID1P14543 Y_RNA.198-201ENST00000364013 98 ntBASIC3.46□□□□□ -1.86
NID1P14543 RNU6-1240P-201ENST00000365155 104 ntBASIC3.46□□□□□ -1.86
NID1P14543 RNU6-234P-201ENST00000365229 104 ntBASIC3.46□□□□□ -1.86
NID1P14543 Y_RNA.362-201ENST00000365518 110 ntBASIC3.46□□□□□ -1.86
NID1P14543 RNA5SP424-201ENST00000390988 115 ntBASIC3.46□□□□□ -1.86
NID1P14543 AL031121.1-201ENST00000406553 254 ntBASIC3.46□□□□□ -1.86
NID1P14543 SNORA3.3-201ENST00000408712 125 ntBASIC3.46□□□□□ -1.86
NID1P14543 AC010099.1-201ENST00000455434 375 ntBASIC3.46□□□□□ -1.86
NID1P14543 RN7SL807P-201ENST00000470923 297 ntBASIC3.46□□□□□ -1.86
NID1P14543 SCARNA13-201ENST00000516672 275 ntBASIC3.46□□□□□ -1.86
NID1P14543 AC109329.2-201ENST00000519658 482 ntBASIC3.46□□□□□ -1.86
NID1P14543 AP000867.2-201ENST00000532468 320 ntBASIC3.46□□□□□ -1.86
NID1P14543 CYCSP30-201ENST00000546447 172 ntBASIC3.46□□□□□ -1.86
NID1P14543 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.46□□□□□ -1.86
NID1P14543 AC087499.8-201ENST00000578406 226 ntBASIC3.46□□□□□ -1.86
NID1P14543 MIR5009-201ENST00000578736 100 ntBASIC3.46□□□□□ -1.86
NID1P14543 AC013412.1-201ENST00000610687 192 ntBASIC3.46□□□□□ -1.86
NID1P14543 AC015726.2-201ENST00000620112 122 ntBASIC3.46□□□□□ -1.86
NID1P14543 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NID1P14543 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
NID1P14543 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NID1P14543 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.46□□□□□ -1.86
NID1P14543 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NID1P14543 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NID1P14543 AL161912.2-201ENST00000565707 3007 ntBASIC3.46□□□□□ -1.86
NID1P14543 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NID1P14543 Y_RNA.213-201ENST00000364178 111 ntBASIC3.45□□□□□ -1.86
NID1P14543 SNORD31B-201ENST00000364977 69 ntBASIC3.45□□□□□ -1.86
NID1P14543 RNU6-1235P-201ENST00000384559 107 ntBASIC3.45□□□□□ -1.86
NID1P14543 MIR483-201ENST00000385070 76 ntBASIC3.45□□□□□ -1.86
NID1P14543 EIF4EP4-201ENST00000424916 578 ntBASIC3.45□□□□□ -1.86
NID1P14543 AC109327.2-201ENST00000448339 378 ntBASIC3.45□□□□□ -1.86
NID1P14543 RNU6-498P-201ENST00000459468 107 ntBASIC3.45□□□□□ -1.86
NID1P14543 RN7SL323P-201ENST00000494712 295 ntBASIC3.45□□□□□ -1.86
NID1P14543 AC097462.1-201ENST00000514125 324 ntBASIC3.45□□□□□ -1.86
NID1P14543 RNU7-172P-201ENST00000517125 64 ntBASIC3.45□□□□□ -1.86
NID1P14543 RNU6-1270P-201ENST00000517128 108 ntBASIC3.45□□□□□ -1.86
NID1P14543 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.45□□□□□ -1.86
NID1P14543 MIR3117-201ENST00000584034 78 ntBASIC3.45□□□□□ -1.86
NID1P14543 AC007179.3-201ENST00000604976 235 ntBASIC3.45□□□□□ -1.86
NID1P14543 SNORD115-40-201ENST00000606510 82 ntBASIC3.45□□□□□ -1.86
NID1P14543 AC002076.2-201ENST00000617362 122 ntBASIC3.45□□□□□ -1.86
NID1P14543 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.45□□□□□ -1.86
NID1P14543 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NID1P14543 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
NID1P14543 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.45□□□□□ -1.86
NID1P14543 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
NID1P14543 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NID1P14543 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NID1P14543 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.44□□□□□ -1.86
NID1P14543 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NID1P14543 MIR30B-201ENST00000384850 88 ntBASIC3.44□□□□□ -1.86
NID1P14543 AL117342.1-201ENST00000404861 406 ntBASIC3.44□□□□□ -1.86
NID1P14543 RNU6-592P-201ENST00000411333 103 ntBASIC3.44□□□□□ -1.86
NID1P14543 AC097463.2-201ENST00000421074 142 ntBASIC3.44□□□□□ -1.86
NID1P14543 MTATP8P2-201ENST00000435212 202 ntBASIC3.44□□□□□ -1.86
NID1P14543 MRPS17P9-201ENST00000511924 393 ntBASIC3.44□□□□□ -1.86
NID1P14543 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.44□□□□□ -1.86
NID1P14543 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.44□□□□□ -1.86
NID1P14543 MIR3200-201ENST00000580767 85 ntBASIC3.44□□□□□ -1.86
NID1P14543 MIR4438-201ENST00000585271 93 ntBASIC3.44□□□□□ -1.86
NID1P14543 AC244505.7-201ENST00000599675 272 ntBASIC3.44□□□□□ -1.86
NID1P14543 SNORA51-201ENST00000606420 132 ntBASIC3.44□□□□□ -1.86
NID1P14543 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NID1P14543 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NID1P14543 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NID1P14543 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
NID1P14543 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NID1P14543 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.43□□□□□ -1.86
NID1P14543 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NID1P14543 Y_RNA.78-201ENST00000362970 110 ntBASIC3.43□□□□□ -1.86
NID1P14543 RNU6-888P-201ENST00000363010 101 ntBASIC3.43□□□□□ -1.86
NID1P14543 SNORD24-201ENST00000383884 75 ntBASIC3.43□□□□□ -1.86
NID1P14543 SNORD61-201ENST00000384252 73 ntBASIC3.43□□□□□ -1.86
NID1P14543 U8.11-201ENST00000384699 133 ntBASIC3.43□□□□□ -1.86
NID1P14543 MIR491-201ENST00000384877 84 ntBASIC3.43□□□□□ -1.86
NID1P14543 MIR759-201ENST00000390224 91 ntBASIC3.43□□□□□ -1.86
NID1P14543 SNORA11.2-201ENST00000408318 127 ntBASIC3.43□□□□□ -1.86
NID1P14543 AC016909.1-201ENST00000415916 166 ntBASIC3.43□□□□□ -1.86
NID1P14543 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.43□□□□□ -1.86
NID1P14543 U8.18-201ENST00000459285 133 ntBASIC3.43□□□□□ -1.86
NID1P14543 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.43□□□□□ -1.86
NID1P14543 AC068339.1-201ENST00000526965 141 ntBASIC3.43□□□□□ -1.86
NID1P14543 MALAT1.1-201ENST00000618249 95 ntBASIC3.43□□□□□ -1.86
NID1P14543 AC009093.8-201ENST00000641769 292 ntBASIC3.43□□□□□ -1.86
NID1P14543 CEP170P1-201ENST00000502249 4587 ntBASIC3.43□□□□□ -1.86
NID1P14543 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NID1P14543 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NID1P14543 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NID1P14543 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NID1P14543 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NID1P14543 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms