Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 AC114982.1-201ENST00000469402 321 ntBASIC3.16□□□□□ -1.9
SYPP08247 AC117454.1-201ENST00000491120 168 ntBASIC3.16□□□□□ -1.9
SYPP08247 ATP5EP1-201ENST00000510257 156 ntBASIC3.16□□□□□ -1.9
SYPP08247 MRPS36P2-201ENST00000512569 299 ntBASIC3.16□□□□□ -1.9
SYPP08247 AC008885.1-201ENST00000514930 301 ntBASIC3.16□□□□□ -1.9
SYPP08247 AC109329.2-201ENST00000519658 482 ntBASIC3.16□□□□□ -1.9
SYPP08247 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.16□□□□□ -1.9
SYPP08247 AC002064.3-201ENST00000623448 346 ntBASIC3.16□□□□□ -1.9
SYPP08247 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
SYPP08247 AC091564.4-201ENST00000533934 2194 ntBASIC3.16□□□□□ -1.9
SYPP08247 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.16□□□□□ -1.9
SYPP08247 RNU6-643P-201ENST00000384018 107 ntBASIC3.15□□□□□ -1.91
SYPP08247 RNU6-975P-201ENST00000384296 105 ntBASIC3.15□□□□□ -1.91
SYPP08247 SNORD14D-201ENST00000384390 87 ntBASIC3.15□□□□□ -1.91
SYPP08247 MIR15B-201ENST00000385045 98 ntBASIC3.15□□□□□ -1.91
SYPP08247 MIR513C-201ENST00000401352 84 ntBASIC3.15□□□□□ -1.91
SYPP08247 AL606845.1-201ENST00000404881 255 ntBASIC3.15□□□□□ -1.91
SYPP08247 SNORA36B-201ENST00000410438 131 ntBASIC3.15□□□□□ -1.91
SYPP08247 RNU6-383P-201ENST00000410864 94 ntBASIC3.15□□□□□ -1.91
SYPP08247 AC006461.1-201ENST00000412637 326 ntBASIC3.15□□□□□ -1.91
SYPP08247 MTND4LP9-201ENST00000427694 174 ntBASIC3.15□□□□□ -1.91
SYPP08247 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.15□□□□□ -1.91
SYPP08247 SNORD65B-201ENST00000459126 73 ntBASIC3.15□□□□□ -1.91
SYPP08247 RPS26P55-201ENST00000471178 356 ntBASIC3.15□□□□□ -1.91
SYPP08247 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.15□□□□□ -1.91
SYPP08247 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.15□□□□□ -1.91
SYPP08247 RNU6-561P-201ENST00000516222 102 ntBASIC3.15□□□□□ -1.91
SYPP08247 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.15□□□□□ -1.91
SYPP08247 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.15□□□□□ -1.91
SYPP08247 MIR4672-201ENST00000583126 81 ntBASIC3.15□□□□□ -1.91
SYPP08247 AP003357.1-201ENST00000604497 148 ntBASIC3.15□□□□□ -1.91
SYPP08247 UCA1.1-201ENST00000620952 75 ntBASIC3.15□□□□□ -1.91
SYPP08247 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SYPP08247 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.15□□□□□ -1.91
SYPP08247 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
SYPP08247 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SYPP08247 RNU6-271P-201ENST00000363858 105 ntBASIC3.14□□□□□ -1.91
SYPP08247 MIR518C-201ENST00000384822 101 ntBASIC3.14□□□□□ -1.91
SYPP08247 RN7SKP284-201ENST00000411002 343 ntBASIC3.14□□□□□ -1.91
SYPP08247 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.14□□□□□ -1.91
SYPP08247 RPL36AP21-201ENST00000490372 323 ntBASIC3.14□□□□□ -1.91
SYPP08247 AC010598.1-201ENST00000510378 103 ntBASIC3.14□□□□□ -1.91
SYPP08247 SCARNA11.3-201ENST00000517276 130 ntBASIC3.14□□□□□ -1.91
SYPP08247 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.14□□□□□ -1.91
SYPP08247 UBL5P2-201ENST00000583788 219 ntBASIC3.14□□□□□ -1.91
SYPP08247 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SYPP08247 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.14□□□□□ -1.91
SYPP08247 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SYPP08247 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SYPP08247 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.14□□□□□ -1.91
SYPP08247 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.13□□□□□ -1.91
SYPP08247 SNORD31B-201ENST00000364977 69 ntBASIC3.13□□□□□ -1.91
SYPP08247 RNU6-407P-201ENST00000365280 104 ntBASIC3.13□□□□□ -1.91
SYPP08247 RNU6-1323P-201ENST00000384025 107 ntBASIC3.13□□□□□ -1.91
SYPP08247 SNORD15B-201ENST00000384714 146 ntBASIC3.13□□□□□ -1.91
SYPP08247 AL031121.1-201ENST00000406553 254 ntBASIC3.13□□□□□ -1.91
SYPP08247 RNU6-57P-201ENST00000411348 103 ntBASIC3.13□□□□□ -1.91
SYPP08247 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.13□□□□□ -1.91
SYPP08247 AC008267.6-201ENST00000441664 139 ntBASIC3.13□□□□□ -1.91
SYPP08247 AC018630.3-201ENST00000542637 96 ntBASIC3.13□□□□□ -1.91
SYPP08247 AC127455.1-201ENST00000565496 145 ntBASIC3.13□□□□□ -1.91
SYPP08247 MIR2682-201ENST00000580305 110 ntBASIC3.13□□□□□ -1.91
SYPP08247 AL033523.1-201ENST00000605153 153 ntBASIC3.13□□□□□ -1.91
SYPP08247 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.13□□□□□ -1.91
SYPP08247 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SYPP08247 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
SYPP08247 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SYPP08247 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SYPP08247 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
SYPP08247 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SYPP08247 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SYPP08247 RNU6-199P-201ENST00000362954 107 ntBASIC3.12□□□□□ -1.91
SYPP08247 RNU6-728P-201ENST00000365375 104 ntBASIC3.12□□□□□ -1.91
SYPP08247 SNORA20-201ENST00000384662 132 ntBASIC3.12□□□□□ -1.91
SYPP08247 AC016717.1-201ENST00000448918 286 ntBASIC3.12□□□□□ -1.91
SYPP08247 RNU7-197P-201ENST00000458836 62 ntBASIC3.12□□□□□ -1.91
SYPP08247 SNORD59.2-201ENST00000516873 68 ntBASIC3.12□□□□□ -1.91
SYPP08247 AC112693.2-201ENST00000556538 232 ntBASIC3.12□□□□□ -1.91
SYPP08247 AC023043.3-201ENST00000593113 385 ntBASIC3.12□□□□□ -1.91
SYPP08247 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.12□□□□□ -1.91
SYPP08247 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SYPP08247 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.12□□□□□ -1.91
SYPP08247 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SYPP08247 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SYPP08247 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.12□□□□□ -1.91
SYPP08247 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SYPP08247 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SYPP08247 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SYPP08247 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SYPP08247 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SYPP08247 AL356292.1-201ENST00000283110 373 ntBASIC3.11□□□□□ -1.91
SYPP08247 RNU1-70P-201ENST00000362618 164 ntBASIC3.11□□□□□ -1.91
SYPP08247 RNY3P5-201ENST00000384127 102 ntBASIC3.11□□□□□ -1.91
SYPP08247 MIR1278-201ENST00000408753 81 ntBASIC3.11□□□□□ -1.91
SYPP08247 RNU4-43P-201ENST00000410628 137 ntBASIC3.11□□□□□ -1.91
SYPP08247 RNU6-1328P-201ENST00000410938 106 ntBASIC3.11□□□□□ -1.91
SYPP08247 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.11□□□□□ -1.91
SYPP08247 AC016925.1-201ENST00000458303 298 ntBASIC3.11□□□□□ -1.91
SYPP08247 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.11□□□□□ -1.91
SYPP08247 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms