Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 AC022149.2-201ENST00000621061 203 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
VRTNQ9H8Y1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.75□□□□□ -1.81
VRTNQ9H8Y1 RNU6-22P-201ENST00000384355 107 ntBASIC3.75□□□□□ -1.81
VRTNQ9H8Y1 MIR1278-201ENST00000408753 81 ntBASIC3.75□□□□□ -1.81
VRTNQ9H8Y1 RNU6-257P-201ENST00000410238 98 ntBASIC3.75□□□□□ -1.81
VRTNQ9H8Y1 RN7SKP220-201ENST00000410611 288 ntBASIC3.75□□□□□ -1.81
VRTNQ9H8Y1 RNU2-48P-201ENST00000410694 191 ntBASIC3.75□□□□□ -1.81
VRTNQ9H8Y1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.75□□□□□ -1.81
VRTNQ9H8Y1 SNORA25.12-201ENST00000516202 82 ntBASIC3.75□□□□□ -1.81
VRTNQ9H8Y1 RNU7-172P-201ENST00000517125 64 ntBASIC3.75□□□□□ -1.81
VRTNQ9H8Y1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.75□□□□□ -1.81
VRTNQ9H8Y1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 RNU1-22P-201ENST00000363334 158 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 SNORA72-201ENST00000384339 132 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 MIR218-2-201ENST00000385006 110 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 SNORA40-201ENST00000388090 126 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 Y_RNA.587-201ENST00000391210 103 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 RPS29P4-201ENST00000414733 161 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 RPS29P31-201ENST00000446147 164 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 snoU13.22-201ENST00000459428 104 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 AC100821.1-201ENST00000523153 2479 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 MIR4429-201ENST00000580105 73 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 U3.45-201ENST00000607547 219 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 U4.6-201ENST00000621618 127 ntBASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.74□□□□□ -1.81
VRTNQ9H8Y1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 RNA5SP125-201ENST00000364843 120 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 Y_RNA.521-201ENST00000384560 114 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 SNORD17-201ENST00000390930 237 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 RNU4-43P-201ENST00000410628 137 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 Y_RNA.622-201ENST00000411091 108 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 AP001486.1-201ENST00000463339 476 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 RPS29P21-201ENST00000496272 170 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 AC097462.1-201ENST00000514125 324 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 RNU6-856P-201ENST00000516959 98 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 AC112693.2-201ENST00000556538 232 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 AC008739.3-201ENST00000603262 127 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 U2.20-201ENST00000613956 192 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 MIR6075-201ENST00000620782 95 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 Z83843.1-201ENST00000604070 3685 ntBASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.73□□□□□ -1.81
VRTNQ9H8Y1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VRTNQ9H8Y1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VRTNQ9H8Y1 SNORA79-201ENST00000408376 140 ntBASIC3.72□□□□□ -1.81
VRTNQ9H8Y1 RNU2-51P-201ENST00000410708 197 ntBASIC3.72□□□□□ -1.81
VRTNQ9H8Y1 RN7SKP101-201ENST00000411376 320 ntBASIC3.72□□□□□ -1.81
VRTNQ9H8Y1 AL357552.1-201ENST00000445254 415 ntBASIC3.72□□□□□ -1.81
VRTNQ9H8Y1 SNRPGP8-201ENST00000454064 226 ntBASIC3.72□□□□□ -1.81
VRTNQ9H8Y1 RNU6-667P-201ENST00000517186 102 ntBASIC3.72□□□□□ -1.81
VRTNQ9H8Y1 LARP7P3-201ENST00000579888 337 ntBASIC3.72□□□□□ -1.81
VRTNQ9H8Y1 MIR6844-201ENST00000637122 62 ntBASIC3.72□□□□□ -1.81
VRTNQ9H8Y1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VRTNQ9H8Y1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 SNORA71.3-201ENST00000362582 128 ntBASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 SNORD45.3-201ENST00000363836 72 ntBASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 RPS27P1-201ENST00000450552 247 ntBASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 RN7SL293P-201ENST00000481765 281 ntBASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 RNU6-479P-201ENST00000516348 105 ntBASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 MIR3646-201ENST00000578301 84 ntBASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 AL929325.1-201ENST00000603096 117 ntBASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VRTNQ9H8Y1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 RNU4-35P-201ENST00000362588 141 ntBASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 MIR183-201ENST00000384958 110 ntBASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 AC060773.1-201ENST00000421698 310 ntBASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 Z96811.1-201ENST00000445880 108 ntBASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 RNU6-1146P-201ENST00000516282 102 ntBASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 MIR2681-201ENST00000581814 105 ntBASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 AL031274.2-201ENST00000599419 203 ntBASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 U6.73-201ENST00000619194 103 ntBASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 ZNF702P-202ENST00000434269 1966 ntBASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VRTNQ9H8Y1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VRTNQ9H8Y1 MIR340-201ENST00000362125 95 ntBASIC3.69□□□□□ -1.82
VRTNQ9H8Y1 RNU6-1180P-201ENST00000364935 107 ntBASIC3.69□□□□□ -1.82
VRTNQ9H8Y1 SNORA25B-201ENST00000365507 128 ntBASIC3.69□□□□□ -1.82
VRTNQ9H8Y1 RNU6-768P-201ENST00000384683 107 ntBASIC3.69□□□□□ -1.82
VRTNQ9H8Y1 RPS4XP11-201ENST00000446897 772 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms