Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNU7-80P-201ENST00000459562 61 ntBASIC4□□□□□ -1.77
GFRA3O60609 HMGB1P22-201ENST00000505315 124 ntBASIC4□□□□□ -1.77
GFRA3O60609 UBL5P1-201ENST00000507979 193 ntBASIC4□□□□□ -1.77
GFRA3O60609 RNU7-25P-201ENST00000516544 62 ntBASIC4□□□□□ -1.77
GFRA3O60609 RNU6-1096P-201ENST00000517089 102 ntBASIC4□□□□□ -1.77
GFRA3O60609 RNU4-60P-201ENST00000517239 135 ntBASIC4□□□□□ -1.77
GFRA3O60609 AC006272.2-201ENST00000594725 163 ntBASIC4□□□□□ -1.77
GFRA3O60609 DLEU2_5.2-201ENST00000610606 84 ntBASIC4□□□□□ -1.77
GFRA3O60609 MIR6868-201ENST00000611215 58 ntBASIC4□□□□□ -1.77
GFRA3O60609 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4□□□□□ -1.77
GFRA3O60609 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4□□□□□ -1.77
GFRA3O60609 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4□□□□□ -1.77
GFRA3O60609 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
GFRA3O60609 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
GFRA3O60609 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.99□□□□□ -1.77
GFRA3O60609 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.99□□□□□ -1.77
GFRA3O60609 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
GFRA3O60609 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.99□□□□□ -1.77
GFRA3O60609 RNU6-614P-201ENST00000384369 107 ntBASIC3.99□□□□□ -1.77
GFRA3O60609 MIR300-201ENST00000401138 83 ntBASIC3.99□□□□□ -1.77
GFRA3O60609 AL022718.1-201ENST00000412004 84 ntBASIC3.99□□□□□ -1.77
GFRA3O60609 CKS1BP6-201ENST00000424932 240 ntBASIC3.99□□□□□ -1.77
GFRA3O60609 AC010285.1-201ENST00000470580 392 ntBASIC3.99□□□□□ -1.77
GFRA3O60609 AC023141.12-201ENST00000512399 199 ntBASIC3.99□□□□□ -1.77
GFRA3O60609 RNU6-557P-201ENST00000516842 110 ntBASIC3.99□□□□□ -1.77
GFRA3O60609 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.99□□□□□ -1.77
GFRA3O60609 EIF4BP1-201ENST00000554881 351 ntBASIC3.99□□□□□ -1.77
GFRA3O60609 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.99□□□□□ -1.77
GFRA3O60609 AC078899.2-201ENST00000595282 212 ntBASIC3.99□□□□□ -1.77
GFRA3O60609 U6.59-201ENST00000615686 107 ntBASIC3.99□□□□□ -1.77
GFRA3O60609 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.99□□□□□ -1.77
GFRA3O60609 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
GFRA3O60609 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
GFRA3O60609 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.99□□□□□ -1.77
GFRA3O60609 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
GFRA3O60609 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA3O60609 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA3O60609 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA3O60609 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA3O60609 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA3O60609 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA3O60609 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.98□□□□□ -1.77
GFRA3O60609 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA3O60609 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA3O60609 Y_RNA.242-201ENST00000364473 110 ntBASIC3.98□□□□□ -1.77
GFRA3O60609 RNA5SP97-201ENST00000365006 84 ntBASIC3.98□□□□□ -1.77
GFRA3O60609 SNORD30.1-201ENST00000391309 70 ntBASIC3.98□□□□□ -1.77
GFRA3O60609 RNA5SP120-201ENST00000410900 112 ntBASIC3.98□□□□□ -1.77
GFRA3O60609 RNU5F-4P-201ENST00000516581 114 ntBASIC3.98□□□□□ -1.77
GFRA3O60609 MIR4753-201ENST00000585119 83 ntBASIC3.98□□□□□ -1.77
GFRA3O60609 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.98□□□□□ -1.77
GFRA3O60609 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.98□□□□□ -1.77
GFRA3O60609 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA3O60609 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.98□□□□□ -1.77
GFRA3O60609 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA3O60609 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.98□□□□□ -1.77
GFRA3O60609 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA3O60609 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.97□□□□□ -1.77
GFRA3O60609 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
GFRA3O60609 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
GFRA3O60609 FAM35DP-201ENST00000323387 2712 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
GFRA3O60609 RNU6-1244P-201ENST00000363614 108 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 Y_RNA.547-201ENST00000384654 119 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 MIR490-201ENST00000384865 128 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 RNU6-1197P-201ENST00000391183 107 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 MIR1183-201ENST00000408856 89 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 Y_RNA.621-201ENST00000411065 96 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 POLR2J4-204ENST00000418424 324 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 AP004371.1-201ENST00000525240 214 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 AC091178.1-203ENST00000584586 279 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.97□□□□□ -1.77
GFRA3O60609 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.97□□□□□ -1.77
GFRA3O60609 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
GFRA3O60609 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GFRA3O60609 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 DHX9P1-201ENST00000436565 3076 ntBASIC3.97□□□□□ -1.77
GFRA3O60609 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.97□□□□□ -1.77
GFRA3O60609 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.97□□□□□ -1.77
GFRA3O60609 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GFRA3O60609 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.97□□□□□ -1.77
GFRA3O60609 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.97□□□□□ -1.77
GFRA3O60609 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GFRA3O60609 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
GFRA3O60609 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
GFRA3O60609 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.77
GFRA3O60609 snoU2_19.1-201ENST00000362361 80 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 SNORD32B-201ENST00000364460 84 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 RNU6-686P-201ENST00000364839 107 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 RNU1-63P-201ENST00000383902 164 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 AL356535.1-201ENST00000440335 398 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 AL133162.1-201ENST00000463228 453 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 AC025518.1-201ENST00000479856 347 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 RNU6-70P-201ENST00000516438 60 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 MIR4438-201ENST00000585271 93 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 AC087685.1-201ENST00000587507 141 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 SNRPGP15-201ENST00000600149 222 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 AC006441.5-201ENST00000612680 209 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 AC006386.2-201ENST00000624491 75 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 AC012005.1-201ENST00000624575 75 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms